| The evolutionarily conserved piRNA-producing locus pi6 is required for male mouse fertility PH Wu, Y Fu, K Cecchini, DM Özata, A Arif, T Yu, C Colpan, I Gainetdinov, ... Nature genetics 52 (7), 728-739, 2020 | 106 | 2020 |
| The piRNA response to retroviral invasion of the koala genome T Yu, BS Koppetsch, S Pagliarani, S Johnston, NJ Silverstein, J Luban, ... Cell 179 (3), 632-643. e12, 2019 | 86 | 2019 |
| Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans DM Özata, T Yu, H Mou, I Gainetdinov, C Colpan, K Cecchini, Y Kaymaz, ... Nature ecology & evolution 4 (1), 156-168, 2020 | 70 | 2020 |
| A benchmark and an algorithm for detecting germline transposon insertions and measuring de novo transposon insertion frequencies T Yu, X Huang, S Dou, X Tang, S Luo, WE Theurkauf, J Lu, Z Weng Nucleic Acids Research 49 (8), e44-e44, 2021 | 30 | 2021 |
| Co-dependent assembly of Drosophila piRNA precursor complexes and piRNA cluster heterochromatin G Zhang, S Tu, T Yu, XO Zhang, SS Parhad, Z Weng, WE Theurkauf Cell reports 24 (13), 3413-3422. e4, 2018 | 26 | 2018 |
| Adaptive evolution targets a piRNA precursor transcription network SS Parhad, T Yu, G Zhang, NP Rice, Z Weng, WE Theurkauf Cell reports 30 (8), 2672-2685. e5, 2020 | 20 | 2020 |
| Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes T Yu, K Fan, DM Özata, G Zhang, Y Fu, WE Theurkauf, PD Zamore, ... Nature communications 12 (1), 73, 2021 | 19 | 2021 |
| YAP1 withdrawal in hepatoblastoma drives therapeutic differentiation of tumor cells to functional hepatocyte‐like cells JL Smith, TC Rodríguez, H Mou, SY Kwan, H Pratt, XO Zhang, Y Cao, ... Hepatology 73 (3), 1011-1027, 2021 | 13 | 2021 |
| Deep sequencing of yeast and mouse tRNAs and tRNA fragments using OTTR HT Gustafsson, C Galan, T Yu, HE Upton, L Ferguson, E Kaymak, Z Weng, ... BioRxiv, 2022.02. 04.479139, 2022 | 11 | 2022 |
| A-MYB/TCFL5 regulatory architecture ensures the production of pachytene piRNAs in placental mammals T Yu, A Biasini, K Cecchini, M Säflund, H Mou, A Arif, A Eghbali, ... RNA 29 (1), 30-43, 2023 | 9 | 2023 |
| piRNA-independent transposon silencing by the Drosophila THO complex G Zhang, T Yu, SS Parhad, S Ho, Z Weng, WE Theurkauf Developmental cell 56 (18), 2623-2635. e5, 2021 | 9 | 2021 |
| The transcription factor TCFL5 responds to A-MYB to elaborate the male meiotic program in mice K Cecchini, A Biasini, T Yu, M Säflund, H Mou, A Arif, A Eghbali, C Colpan, ... Reproduction 165 (2), 183-196, 2023 | 7 | 2023 |
| Epigenetic and chromosomal features drive transposon insertion in Drosophila melanogaster J Cao, T Yu, B Xu, Z Hu, X Zhang, WE Theurkauf, Z Weng Nucleic Acids Research 51 (5), 2066-2086, 2023 | 6 | 2023 |
| CRISPR‐induced exon skipping of β‐catenin reveals tumorigenic mutants driving distinct subtypes of liver cancer H Mou, O Eskiocak, KA Özler, M Gorman, J Yue, Y Jin, Z Wang, Y Gao, ... The Journal of Pathology 259 (4), 415-427, 2023 | 4 | 2023 |
| Aub, Vasa and Armi localization to phase separated nuage is dispensable for piRNA biogenesis and transposon silencing in Drosophila S Ho, NP Rice, T Yu, Z Weng, WE Theurkauf bioRxiv, 2023 | 1 | 2023 |
| Hypermigration of macrophages through the concerted action of GRA effectors on NF-κB/p38 signaling and host chromatin accessibility potentiates Toxoplasma dissemination AL Ten Hoeve, ME Rodriguez, M Säflund, V Michel, L Magimel, A Ripoll, ... bioRxiv, 2024.02. 06.579146, 2024 | | 2024 |
| Single-cell transcriptomic and genomic changes in the aging human brain AM Jeffries, T Yu, JS Ziegenfuss, AK Tolles, Y Kim, Z Weng, MA Lodato bioRxiv, 2023 | | 2023 |
Zhiping WengProf & Chair, Department of Genomics and Computational Biology, UMASS Medical SchoolVerified email at umassmed.edu
