| The evolution of Protégé: an environment for knowledge-based systems development JH Gennari, MA Musen, RW Fergerson, WE Grosso, M Crubézy, ... International Journal of Human-computer studies 58 (1), 89-123, 2003 | 1791 | 2003 |
| Models of incremental concept formation JH Gennari, P Langley, D Fisher Artificial intelligence 40 (1-3), 11-61, 1989 | 1158 | 1989 |
| The guideline interchange format: a model for representing guidelines L Ohno-Machado, JH Gennari, SN Murphy, NL Jain, SW Tu, DE Oliver, ... Journal of the American Medical Informatics Association 5 (4), 357-372, 1998 | 540 | 1998 |
| Knowledge modeling at the millennium: The design and evolution of Protégé-2000 W Grosso, H Eriksson, R Fergerson, J Gennari, S Tu, M Musen | 430 | 1999 |
| The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ... Nature biotechnology 32 (6), 545-550, 2014 | 332 | 2014 |
| Incorporating ideas from computer-supported cooperative work W Pratt, MC Reddy, DW McDonald, P Tarczy-Hornoch, JH Gennari Journal of biomedical informatics 37 (2), 128-137, 2004 | 240 | 2004 |
| Mapping domains to methods in support of reuse JH Gennari, SW Tu, TE Rothenfluh, MA Musen International Journal of Human-Computer Studies 41 (3), 399-424, 1994 | 223 | 1994 |
| Domain ontologies in software engineering: use of Protege with the EON architecture MA Musen Methods of Information in Medicine 37 (04/05), 540-550, 1998 | 217 | 1998 |
| Ontology-based configuration of problem-solving methods and generation of knowledge-acquisition tools: application of PROTEGE-II to protocol-based decision support SW Tu, H Eriksson, JH Gennari, Y Shahar, MA Musen Artificial intelligence in medicine 7 (3), 257-289, 1995 | 215 | 1995 |
| PROTEGE-II: computer support for development of intelligent systems from libraries of components MA Musen, JH Gennari, H Eriksson, SW Tu, AR Puerta Medinfo 8 (Pt 1), 766-770, 1995 | 180 | 1995 |
| Component-based support for building knowledge-acquisition systems MA Musen, RW Fergerson, WE Grosso, NF Noy, M Crubezy, JH Gennari Conference on intelligent information processing (IIP 2000) of the …, 2000 | 132 | 2000 |
| Evaluating clinical decision support systems: monitoring CPOE order check override rates in the Department of Veterans Affairs' Computerized Patient Record System CP Lin, TH Payne, WP Nichol, PJ Hoey, CL Anderson, JH Gennari Journal of the American Medical Informatics Association 15 (5), 620-626, 2008 | 131 | 2008 |
| Standard biological parts knowledgebase M Galdzicki, C Rodriguez, D Chandran, HM Sauro, JH Gennari PloS one 6 (2), e17005, 2011 | 125 | 2011 |
| Asynchronous collaborative writing through annotations C Weng, JH Gennari Proceedings of the 2004 ACM conference on Computer supported cooperative …, 2004 | 121 | 2004 |
| Reusable ontologies, knowledge-acquisition tools, and performance systems: PROTÉGÉ-II solutions to Sisyphus-2 TE Rothenfluh, JH Gennari, H Eriksson, AR Puerta, SW Tu, MA Musen International journal of human-computer studies 44 (3-4), 303-332, 1996 | 119 | 1996 |
| Medical informatics: searching for underlying components MA Musen Methods of information in medicine 41 (01), 12-19, 2002 | 104 | 2002 |
| Sharing structure and function in biological design with SBOL 2.0 N Roehner, J Beal, K Clancy, B Bartley, G Misirli, R Grunberg, ... ACS synthetic biology 5 (6), 498-506, 2016 | 100 | 2016 |
| Making generic guidelines site-specific. DB Fridsma, JH Gennari, MA Musen Proceedings of the AMIA Annual Fall Symposium, 597, 1996 | 87 | 1996 |
| Integrating systems biology models and biomedical ontologies R Hoehndorf, M Dumontier, JH Gennari, S Wimalaratne, B De Bono, ... BMC systems biology 5, 1-16, 2011 | 80 | 2011 |
| Beyond data models for automated user interface generation AR Puerta, H Eriksson, JH Gennari, MA Musen BCS HCI, 353-366, 1994 | 80 | 1994 |
