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Mark H Kunitomi
Mark H Kunitomi
IBM Research, Almaden
Verified email at ibm.com
Title
Cited by
Cited by
Year
Circulating immune cells mediate a systemic RNAi-based adaptive antiviral response in Drosophila
M Tassetto, M Kunitomi, R Andino
Cell 169 (2), 314-325. e13, 2017
2492017
Cricket paralysis virus antagonizes Argonaute 2 to modulate antiviral defense in Drosophila
A Nayak, B Berry, M Tassetto, M Kunitomi, A Acevedo, C Deng, ...
Nature structural & molecular biology 17 (5), 547-554, 2010
2402010
Harnessing endogenous miRNAs to control virus tissue tropism as a strategy for developing attenuated virus vaccines
D Barnes, M Kunitomi, M Vignuzzi, K Saksela, R Andino
Cell host & microbe 4 (3), 239-248, 2008
2112008
The diversity, structure, and function of heritable adaptive immunity sequences in the Aedes aegypti genome
ZJ Whitfield, PT Dolan, M Kunitomi, M Tassetto, MG Seetin, S Oh, ...
Current Biology 27 (22), 3511-3519. e7, 2017
1572017
Control of RNA viruses in mosquito cells through the acquisition of vDNA and endogenous viral elements
M Tassetto, M Kunitomi, ZJ Whitfield, PT Dolan, I Sánchez-Vargas, ...
Elife 8, e41244, 2019
1082019
RNA interference-mediated intrinsic antiviral immunity in invertebrates
A Nayak, M Tassetto, M Kunitomi, R Andino
Intrinsic Immunity, 183-200, 2013
792013
Food authentication from shotgun sequencing reads with an application on high protein powders
N Haiminen, S Edlund, D Chambliss, M Kunitomi, BC Weimer, B Ganesan, ...
NPJ science of food 3 (1), 24, 2019
332019
Monitoring the microbiome for food safety and quality using deep shotgun sequencing
KL Beck, N Haiminen, D Chambliss, S Edlund, M Kunitomi, BC Huang, ...
npj Science of Food 5 (1), 3, 2021
252021
Functional genomics platform, a cloud-based platform for studying microbial life at scale
EE Seabolt, G Nayar, H Krishnareddy, A Agarwal, KL Beck, I Terrizzano, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (2 …, 2020
232020
Evaluation of intel 3D-xpoint NVDIMM technology for memory-intensive genomic workloads
D Waddington, M Kunitomi, C Dickey, S Rao, A Abboud, J Tran
Proceedings of the International Symposium on Memory Systems, 277-287, 2019
232019
Analysis and forecasting of global real time RT-PCR primers and probes for SARS-CoV-2
G Nayar, EE Seabolt, M Kunitomi, A Agarwal, KL Beck, V Mukherjee, ...
Scientific Reports 11 (1), 8988, 2021
192021
The antiviral role of rna interference
ML Flenniken, M Kunitomi, M Tassetto, R Andino
Caister Academic Press: Norfolk, UK, 367-388, 2010
82010
Intrinsic Immunity
A Nayak, M Tassetto, M Kunitomi, R Andino, BR Cullen
Berlin, Heidelberg: Springer Berlin Heidelberg, 2013
72013
Insular microbiogeography: Three pathogens as exemplars
JH Kaufman, CA Elkins, M Davis, AM Weis, BC Huang, MK Mammel, ...
Current issues in molecular biology 36 (1), 89-108, 2020
62020
Long-read assembly of the Aedes aegypti genome reveals the nature of heritable adaptive immunity sequences
R Andino, W Zach, PT Dolan, M Kunitomi, M Tassato
Curr Biol 27, 3511-3519, 2017
52017
Methods of automatically and self-consistently correcting genome databases
JH Kaufman, MA Davis, M Kunitomi, KL Clarkson
US Patent 11,347,810, 2022
42022
Semi-supervised pipeline for autonomous annotation of SARS-CoV-2 genomes
KL Beck, E Seabolt, A Agarwal, G Nayar, S Bianco, H Krishnareddy, ...
Viruses 13 (12), 2426, 2021
42021
Predicting epitope candidates for SARS-CoV-2
A Agarwal, KL Beck, S Capponi, M Kunitomi, G Nayar, E Seabolt, ...
Viruses 14 (8), 1837, 2022
32022
A recommender system for antimicrobial resistance
S Swaminathan, DY Zubarev, M Kunitomi
2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019
32019
Exploiting functional context in biology: Reconsidering classification of bacterial life
JH Kaufman, E Seabolt, M Kunitomi, A Agarwal, K Beck, H Krishnareddy, ...
2018 IEEE 34th International Conference on Data Engineering Workshops (ICDEW …, 2018
32018
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