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Fatima Zohra Smaili
Fatima Zohra Smaili
Verified email at mail.mcgill.ca
Title
Cited by
Cited by
Year
Semantic similarity and machine learning with ontologies.
M Kulmanov, FZ Smaili, X Gao, R Hoehndorf
Briefings in Bioinformatics, 2020
1592020
Opa2vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction
FZ Smaili, X Gao, R Hoehndorf
Bioinformatics, 2019
1542019
Onto2vec: joint vector-based representation of biological entities and their ontology-based annotations
FZ Smaili, X Gao, R Hoehndorf
Bioinformatics 34 (13), i52-i60, 2018
1302018
Formal axioms in biomedical ontologies improve analysis and interpretation of associated data
FZ Smaili, X Gao, R Hoehndorf
Bioinformatics, 2019
272019
Machine learning with biomedical ontologies
M Kulmanov, FZ Smaili, X Gao, R Hoehndorf
biorxiv, 2020.05. 07.082164, 2020
222020
QAUST: protein function prediction using structure similarity, protein interaction, and functional motifs
FZ Smaili, S Tian, A Roy, M Alazmi, ST Arold, S Mukherjee, PS Hefty, ...
Genomics, Proteomics and Bioinformatics 19 (6), 998-1011, 2021
202021
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology
Y He, H Yu, A Huffman, AY Lin, DA Natale, J Beverley, L Zheng, Y Perl, ...
Journal of biomedical semantics 13 (1), 25, 2022
112022
Machine learning with biomedical ontologies. bioRxiv, 2020–0507082164
M Kulmanov, FZ Smaili, X Gao, R Hoehndorf
Chap. New Results, 2020
52020
Machine learning with biomedical ontologies. bioRxiv, 2020–0507082164 (2020)
M Kulmanov, FZ Smaili, X Gao, R Hoehndorf
Chap. New Results. doi 10 (2020.05), 07.082164, 0
5
Design and Use of Semantic Resources: Findings from the Section on Knowledge Representation and Management of the 2020 International Medical Informatics Association Yearbook
F Dhombres, J Charlet
Yearbook of medical informatics 29 (01), 163-168, 2020
42020
Machine learning models for biomedical ontology integration and analysis
FZ Smaili
12020
Self-normalizing learning on biomedical ontologies using a deep Siamese neural network
FZ Smaili, X Gao, R Hoehndorf
bioRxiv, 2020.04. 23.057117, 2020
12020
bio-ontology-research-group/machine-learning-with-ontologies
M Kulmanov, FZ Smaili, X Gao, R Hoehndorf
Github, 2020
2020
Ontology-based Representations of Biological Entities
F Zohra Smaili, X Gao, R Hoehndorh
2020
Ontology-based Vector Representations of Biological Entities
F Zohra Smaili, X Gao, R Hoehndorf
2019
bio-ontology-research-group/tsoe: Task Specific Ontology Evaluation
FZ Smaili, X Gao, R Hoehndorf
Github, 2019
2019
Supplementary Materials: Formal axioms in biomedical ontologies improve analysis and interpretation of associated data
FZ Smaili, X Gao, R Hoehndorf
2019
OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction
F Zohra Smaili, X Gao, R Hoehndorf
arXiv e-prints, arXiv: 1804.10922, 2018
2018
bio-ontology-research-group/onto2vec: Representation learning for ontologies and their annotations
FZ Smaili, X Gao, R Hoehndorf
Github, 2018
2018
Protein Function Prediction Based on Sequence and Structure Information
FZ Smaili
2016
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Articles 1–20