Matthew M. Hindle
Matthew M. Hindle
Postdoctoral Researcher, University of Edinburgh
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Cited by
Cited by
New perspectives on glutamine synthetase in grasses
SM Swarbreck, M Defoin-Platel, M Hindle, M Saqi, DZ Habash
Journal of Experimental Botany 62 (4), 1511-1522, 2011
Developing integrated crop knowledge networks to advance candidate gene discovery
K Hassani-Pak, M Castellote, M Esch, M Hindle, A Lysenko, J Taubert, ...
Applied & Translational Genomics 11, 18-26, 2016
Systems responses to progressive water stress in durum wheat
DZ Habash, M Baudo, M Hindle, SJ Powers, M Defoin-Platel, R Mitchell, ...
PLoS One 9 (9), e108431, 2014
Classifying chemical mode of action using gene networks and machine learning: a case study with the herbicide linuron
A Ornostay, AM Cowie, M Hindle, CJO Baker, CJ Martyniuk
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 8 (4 …, 2013
Functional analysis of casein kinase 1 in a minimal circadian system
G van Ooijen, M Hindle, SF Martin, M Barrios-Llerena, F Sanchez, ...
PLoS One 8 (7), e70021, 2013
The quail genome: insights into social behaviour, seasonal biology and infectious disease response
KM Morris, MM Hindle, S Boitard, DW Burt, AF Danner, L Eory, HL Forrest, ...
Bmc Biology 18 (1), 1-18, 2020
Circadian clock mechanism driving mammalian photoperiodism
SH Wood, MM Hindle, Y Mizoro, Y Cheng, BRC Saer, K Miedzinska, ...
Nature Communications 11 (1), 4291, 2020
Data integration for plant genomics—exemplars from the integration of Arabidopsis thaliana databases
A Lysenko, MM Hindle, J Taubert, M Saqi, CJ Rawlings
Briefings in bioinformatics 10 (6), 676-693, 2009
The OXL format for the exchange of integrated datasets
J Taubert, KP Sieren, M Hindle, B Hoekman, R Winnenburg, S Philippi, ...
Journal of Integrative Bioinformatics 4 (3), 27-40, 2007
Label‐free quantitative analysis of the casein kinase 2‐responsive phosphoproteome of the marine minimal model species Ostreococcus tauri
T Le Bihan, M Hindle, SF Martin, ME Barrios‐Llerena, J Krahmer, K Kis, ...
Proteomics 15 (23-24), 4135-4144, 2015
The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species
MM Hindle, SF Martin, ZB Noordally, G Van Ooijen, ME Barrios-Llerena, ...
BMC genomics 15 (1), 1-21, 2014
Circadian protein regulation in the green lineage II. The clock gene circuit controls a phospho-dawn in Arabidopsis thaliana
J Krahmer, M Hindle, LK Perby, TH Nielsen, G Van Ooijen, KJ Halliday, ...
Graph-based sequence annotation using a data integration approach
R Pesch, A Lysenko, M Hindle, K Hassani-Pak, R Thiele, C Rawlings, ...
Journal of Integrative Bioinformatics 5 (2), 58-72, 2008
The circadian clock gene circuit controls protein and phosphoprotein rhythms in Arabidopsis thaliana
J Krahmer, M Hindle, LK Perby, HK Mogensen, TH Nielsen, KJ Halliday, ...
Molecular & Cellular Proteomics 21 (1), 2022
AIGO: Towards a unified framework for the Analysis and the Inter-comparison of GO functional annotations
M Defoin-Platel, MM Hindle, A Lysenko, SJ Powers, DZ Habash, ...
BMC bioinformatics 12 (1), 1-13, 2011
Circadian protein regulation in the green lineage I. A phospho-dawn anticipates light onset before proteins peak in daytime
ZB Noordally, MM Hindle, SF Martin, DD Seaton, TI Simpson, TL Bihan, ...
bioRxiv, 287862, 2018
Benchmarking infrastructure for mutation text mining
A Klein, A Riazanov, MM Hindle, CJO Baker
Journal of Biomedical Semantics 5, 1-13, 2014
Functional analysis of the rodent CK1tau mutation in the circadian clock of a marine unicellular alga
G van Ooijen, SF Martin, ME Barrios-Llerena, M Hindle, T Le Bihan, ...
BMC cell biology 14, 1-12, 2013
Sample preparation for phosphoproteomic analysis of circadian time series in Arabidopsis thaliana
J Krahmer, MM Hindle, SF Martin, T Le Bihan, AJ Millar
Methods in enzymology 551, 405-431, 2015
Linking life sciences data using graph-based mapping
J Taubert, M Hindle, A Lysenko, J Weile, J Köhler, CJ Rawlings
Data Integration in the Life Sciences: 6th International Workshop, DILS 2009 …, 2009
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Articles 1–20