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Lawrence Kelley
Lawrence Kelley
Verified email at imperial.ac.uk - Homepage
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The Phyre2 web portal for protein modeling, prediction and analysis
LA Kelley, S Mezulis, CM Yates, MN Wass, MJE Sternberg
Nature protocols 10 (6), 845-858, 2015
99862015
Protein structure prediction on the Web: a case study using the Phyre server
LA Kelley, MJE Sternberg
Nature protocols 4 (3), 363-371, 2009
51902009
Enhanced genome annotation using structural profiles in the program 3D-PSSM
LA Kelley, RM MacCallum, MJE Sternberg
Journal of molecular biology 299 (2), 501-522, 2000
18742000
3DLigandSite: predicting ligand-binding sites using similar structures
MN Wass, LA Kelley, MJE Sternberg
Nucleic acids research 38 (suppl_2), W469-W473, 2010
7722010
Enhancement of protein modeling by human intervention in applying the automatic programs 3D‐JIGSAW and 3D‐PSSM
PA Bates, LA Kelley, RM MacCallum, MJE Sternberg
Proteins: Structure, Function, and Bioinformatics 45 (S5), 39-46, 2001
7382001
An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies
LA Kelley, SP Gardner, MJ Sutcliffe
Protein Engineering, Design and Selection 9 (11), 1063-1065, 1996
5721996
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre
RM Bennett‐Lovsey, AD Herbert, MJE Sternberg, LA Kelley
Proteins: Structure, Function, and Bioinformatics 70 (3), 611-625, 2008
5372008
ePlant: visualizing and exploring multiple levels of data for hypothesis generation in plant biology
J Waese, J Fan, A Pasha, H Yu, G Fucile, R Shi, M Cumming, LA Kelley, ...
The Plant Cell 29 (8), 1806-1821, 2017
3412017
SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features
CM Yates, I Filippis, LA Kelley, MJE Sternberg
Journal of molecular biology 426 (14), 2692-2701, 2014
2472014
CAFASP‐1: Critical assessment of fully automated structure prediction methods
D Fischer, C Barret, K Bryson, A Elofsson, A Godzik, D Jones, KJ Karplus, ...
Proteins: Structure, Function, and Bioinformatics 37 (S3), 209-217, 1999
2321999
Progress in protein structure prediction: assessment of CASP3
MJE Sternberg, PA Bates, LA Kelley, RM MacCallum
Current Opinion in Structural Biology 9 (3), 368-373, 1999
1681999
Predicting the sub-cellular location of proteins from text using support vector machines
BJ Stapley, LA Kelley, MJE Sternberg
Biocomputing 2002, 374-385, 2001
1222001
Protein folding requires crowd control in a simulated cell
BR Jefferys, LA Kelley, MJE Sternberg
Journal of molecular biology 397 (5), 1329-1338, 2010
1212010
SAWTED: structure assignment with text description—enhanced detection of remote homologues with automated SWISS-PROT annotation comparisons
RM MacCallum, LA Kelley, MJE Sternberg
Bioinformatics 16 (2), 125-129, 2000
752000
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains
TE Lewis, I Sillitoe, A Andreeva, TL Blundell, DWA Buchan, C Chothia, ...
Nucleic acids research 41 (D1), D499-D507, 2012
722012
An automated approach for defining core atoms and domains in an ensemble of NMR-derived protein structures.
LA Kelley, SP Gardner, MJ Sutcliffe
Protein engineering 10 (6), 737-741, 1997
691997
Recognition of remote protein homologies using three-dimensional information to generate a position specific scoring matrix in the program 3D-PSSM
LA Kelley, RM MacCallum, MJE Sternberg
Proceedings of the third annual international conference on Computational …, 1999
641999
High–quality protein backbone reconstruction from alpha carbons using Gaussian mixture models
BL Moore, LA Kelley, J Barber, JW Murray, JT MacDonald
Journal of computational chemistry 34 (22), 1881-1889, 2013
632013
OLDERADO: On‐line database of ensemble representatives and domains
LA Kelley, MJ Sutcliffe
Protein science 6 (12), 2628-2630, 1997
631997
Functional significance of mutations in the Snf2 domain of ATRX
M Mitson, LA Kelley, MJE Sternberg, DR Higgs, RJ Gibbons
Human molecular genetics 20 (13), 2603-2610, 2011
572011
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