Jonathan Keith

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	All	Since 2018
Citations	1307	599
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i10-index	41	17

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Dirk P KroeseProfessor of Mathematics and Statistics, The University of QueenslandVerified email at maths.uq.edu.au
Kerrie MengersenQueensland University of TechnologyVerified email at qut.edu.au
Georgy SofronovAssociate Professor, School of Mathematical and Physical Sciences, Macquarie University, SydneyVerified email at mq.edu.au
David M. PaganinSchool of Physics and Astronomy, Monash University, AustraliaVerified email at monash.edu
Jim ThomsonArthur Rylah Institute for Environmental ResearchVerified email at delwp.vic.gov.au
Ralph Mac NallyHonorary Professorial Fellow, The University of MelbourneVerified email at unimelb.edu.au
Jian YenArthur Rylah Institute for Environmental ResearchVerified email at delwp.vic.gov.au
Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandVerified email at uq.edu.au
Rob BeikoAssociate Professor of Computer Science, Dalhousie UniversityVerified email at dal.ca
Chris OldmeadowHunter Medical Research InstituteVerified email at newcastle.edu.au
Robin NunkesserProfessor of Computer Science, Hamm-Lippstadt University of Applied SciencesVerified email at hshl.de
Sarah BoydMonash UniversityVerified email at monash.edu
Joanne M. BennettAustralian National University, Fenner School of Environment and SocietyVerified email at anu.edu.au
Nick MartinQIMR Berghofer Medical Research InstituteVerified email at qimrberghofer.edu.au
Peter VisscherProfessor of Quantitative Genetics, University of QueenslandVerified email at uq.edu.au
Allan F McRaeGroup Leader, Institute for Molecular Bioscience, Universtiy of QueenslandVerified email at uq.edu.au
Marcus GallagherUniversity of QueenslandVerified email at uq.edu.au
Ian WoodLecturer in Statistics, University of QueenslandVerified email at uq.edu.au
Robert Bryson-RichardsonSchool of Biological Sciences, Monash UniversityVerified email at monash.edu
Traude BeilharzMonash UniversityVerified email at monash.edu

Jonathan Keith

Monash University

Verified email at monash.edu

bioinformatics comparative genomics Bayesian methods Markov chain Monte Carlo mathematical ecology


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Methods for identifying SNP interactions: a review on variations of Logic Regression, Random Forest and Bayesian logistic regression CCM Chen, H Schwender, J Keith, R Nunkesser, K Mengersen, ... IEEE/ACM transactions on computational biology and bioinformatics 8 (6 …, 2011	103	2011
Searching for convergence in phylogenetic Markov chain Monte Carlo RG Beiko, JM Keith, TJ Harlow, MA Ragan Systematic biology 55 (4), 553-565, 2006	71	2006
Agent-based models of malaria transmission: a systematic review NR Smith, JM Trauer, M Gambhir, JS Richards, RJ Maude, JM Keith, ... Malaria journal 17 (1), 1-16, 2018	69	2018
A simulated annealing algorithm for finding consensus sequences JM Keith, P Adams, D Bryant, DP Kroese, KR Mitchelson, DAE Cochran, ... Bioinformatics 18 (11), 1494-1499, 2002	61	2002
Sequence alignment by rare event simulation J Keith, DP Kroese Proceedings of the Winter Simulation Conference 1, 320-327, 2002	55	2002
Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs JM Keith, D Spring Proceedings of the National Academy of Sciences 110 (33), 13428-13433, 2013	50	2013
Adaptive independence samplers JM Keith, DP Kroese, GY Sofronov Statistics and Computing 18, 409-420, 2008	47	2008
Method for sequence analysis J Keith, D Bryant, P Adams US Patent App. 10/673,938, 2004	43	2004
Unlocking hidden genomic sequence JM Keith, DAE Cochran, GH Lala, P Adams, D Bryant, KR Mitchelson Nucleic acids research 32 (3), e35-e35, 2004	40	2004
A generalized Markov sampler JM Keith, DP Kroese, D Bryant Methodology and Computing in Applied Probability 6, 29-53, 2004	39	2004
Estimating change-points in biological sequences via the cross-entropy method GE Evans, GY Sofronov, JM Keith, DP Kroese Annals of Operations Research 189 (1), 155, 2011	36	2011
Segmenting eukaryotic genomes with the generalized Gibbs sampler JM Keith Journal of Computational Biology 13 (7), 1369-1383, 2006	33	2006
Recent advances and future perspectives for automated parameterisation, Bayesian inference and machine learning in voltammetry L Gundry, SX Guo, G Kennedy, J Keith, M Robinson, D Gavaghan, ... Chemical Communications 57 (15), 1855-1870, 2021	29	2021
Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges A Alahmadi, S Belet, A Black, D Cromer, JA Flegg, T House, ... Epidemics 32, 100393, 2020	29	2020
Linking species richness and size diversity in birds and fishes JDL Yen, JR Thomson, JM Keith, DM Paganin, E Fleishman, AF Bennett, ... Ecography 41 (12), 1979-1991, 2018	29	2018
Function regression in ecology and evolution: FREE JDL Yen, JR Thomson, DM Paganin, JM Keith, R Mac Nally Methods in Ecology and Evolution 6 (1), 17-26, 2015	26	2015
Bioinformatics: Data, sequence analysis and evolution JM Keith Humana Press, 2008	26	2008
Calculation of IBD probabilities with dense SNP or sequence data JM Keith, A McRae, D Duffy, K Mengersen, PM Visscher Genetic Epidemiology: The Official Publication of the International Genetic …, 2008	25	2008
Parallel cross-entropy optimization GE Evans, JM Keith, DP Kroese 2007 Winter Simulation Conference, 2196-2202, 2007	25	2007
Bayesian inference in estimation of distribution algorithms M Gallagher, I Wood, J Keith, G Sofronov 2007 IEEE Congress on Evolutionary Computation, 127-133, 2007	24	2007

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