Jonathan Keith
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Methods for identifying SNP interactions: a review on variations of Logic Regression, Random Forest and Bayesian logistic regression
CCM Chen, H Schwender, J Keith, R Nunkesser, K Mengersen, ...
IEEE/ACM transactions on computational biology and bioinformatics 8 (6 …, 2011
Searching for convergence in phylogenetic Markov chain Monte Carlo
RG Beiko, JM Keith, TJ Harlow, MA Ragan
Systematic biology 55 (4), 553-565, 2006
Agent-based models of malaria transmission: a systematic review
NR Smith, JM Trauer, M Gambhir, JS Richards, RJ Maude, JM Keith, ...
Malaria journal 17 (1), 1-16, 2018
A simulated annealing algorithm for finding consensus sequences
JM Keith, P Adams, D Bryant, DP Kroese, KR Mitchelson, DAE Cochran, ...
Bioinformatics 18 (11), 1494-1499, 2002
Sequence alignment by rare event simulation
J Keith, DP Kroese
Proceedings of the Winter Simulation Conference 1, 320-327, 2002
Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs
JM Keith, D Spring
Proceedings of the National Academy of Sciences 110 (33), 13428-13433, 2013
Adaptive independence samplers
JM Keith, DP Kroese, GY Sofronov
Statistics and Computing 18, 409-420, 2008
Method for sequence analysis
J Keith, D Bryant, P Adams
US Patent App. 10/673,938, 2004
Unlocking hidden genomic sequence
JM Keith, DAE Cochran, GH Lala, P Adams, D Bryant, KR Mitchelson
Nucleic acids research 32 (3), e35-e35, 2004
A generalized Markov sampler
JM Keith, DP Kroese, D Bryant
Methodology and Computing in Applied Probability 6, 29-53, 2004
Estimating change-points in biological sequences via the cross-entropy method
GE Evans, GY Sofronov, JM Keith, DP Kroese
Annals of Operations Research 189 (1), 155, 2011
Segmenting eukaryotic genomes with the generalized Gibbs sampler
JM Keith
Journal of Computational Biology 13 (7), 1369-1383, 2006
Recent advances and future perspectives for automated parameterisation, Bayesian inference and machine learning in voltammetry
L Gundry, SX Guo, G Kennedy, J Keith, M Robinson, D Gavaghan, ...
Chemical Communications 57 (15), 1855-1870, 2021
Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges
A Alahmadi, S Belet, A Black, D Cromer, JA Flegg, T House, ...
Epidemics 32, 100393, 2020
Linking species richness and size diversity in birds and fishes
JDL Yen, JR Thomson, JM Keith, DM Paganin, E Fleishman, AF Bennett, ...
Ecography 41 (12), 1979-1991, 2018
Function regression in ecology and evolution: FREE
JDL Yen, JR Thomson, DM Paganin, JM Keith, R Mac Nally
Methods in Ecology and Evolution 6 (1), 17-26, 2015
Bioinformatics: Data, sequence analysis and evolution
JM Keith
Humana Press, 2008
Calculation of IBD probabilities with dense SNP or sequence data
JM Keith, A McRae, D Duffy, K Mengersen, PM Visscher
Genetic Epidemiology: The Official Publication of the International Genetic …, 2008
Parallel cross-entropy optimization
GE Evans, JM Keith, DP Kroese
2007 Winter Simulation Conference, 2196-2202, 2007
Bayesian inference in estimation of distribution algorithms
M Gallagher, I Wood, J Keith, G Sofronov
2007 IEEE Congress on Evolutionary Computation, 127-133, 2007
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