Martin Vingron

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Stefan MundlosInstitut für Medizinische Genetik und Humangenetik, CharitéVerified email at molgen.mpg.de
Wolfgang HuberEMBL - European Molecular Biology LaboratoryVerified email at embl.org
Thomas MankeHead of Bioinformatics and Deep-Sequencing Unit, Max Planck Institute for Immunobiology andVerified email at ie-freiburg.mpg.de
Marcel H SchulzProfessor of Computational Biology, Goethe University Frankfurt, GermanyVerified email at em.uni-frankfurt.de
Ho-Ryun ChungPhilipps-Universität Marburg, GemanyVerified email at molgen.mpg.de
Utz PapeLead Economist, World BankVerified email at worldbank.org
Holger SültmannProfessor for Cancer Genome Research, DKFZ HeidelbergVerified email at dkfz.de
Verena HeinrichMax Planck Institute for Molecular GeneticsVerified email at molgen.mpg.de
Alvis BrazmaEMBL Scientist EmeritusVerified email at ebi.ac.uk
Heiko A. SchmidtCenter for Integrative Bioinformatics Vienna (CIBIV)Verified email at univie.ac.at
Arndt von HaeselerMax Perutz Labs University of Vienna, Medical University of ViennaVerified email at univie.ac.at
Matthias HeinigInstitute of Computational Biology, Helmholtz Zentrum MünchenVerified email at helmholtz-muenchen.de
Andrey GuillaumeAssistant Professor, University of GenevaVerified email at unige.ch
Annalisa MarsicoHelmholtz MunichVerified email at helmholtz-muenchen.de
Christoph DieterichProfessor Bioinformatik & Systemkardiologie, HeidelbergVerified email at uni-heidelberg.de
Tobias MüllerBioinformatics Department, University of WürzburgVerified email at biozentrum.uni-wuerzburg.de
Daniel Murad IbrahimGroup Leader, Berlin Institute of HealthVerified email at molgen.mpg.de
Korbinian StrimmerDepartment of Mathematics, The University of ManchesterVerified email at manchester.ac.uk
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Verified email at bsc.es
Hugues RichardRobert Koch Institute (Researcher) / Sorbonne University (Ass. Prof., on leave)Verified email at upmc.fr

Martin Vingron

Max-Planck-Institut für molekulare Genetik

Verified email at molgen.mpg.de

Computational Biology


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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4965	2001
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing HA Schmidt, K Strimmer, M Vingron, A Von Haeseler Bioinformatics 18 (3), 502-504, 2002	2901	2002
Variance stabilization applied to microarray data calibration and to the quantification of differential expression W Huber, A Von Heydebreck, H Sültmann, A Poustka, M Vingron Bioinformatics 18 (suppl_1), S96-S104, 2002	2900	2002
A gene expression map of Arabidopsis thaliana development M Schmid, TS Davison, SR Henz, UJ Pape, M Demar, M Vingron, ... Nature genetics 37 (5), 501-506, 2005	2819	2005
Comprehensive genomic profiles of small cell lung cancer J George, JS Lim, SJ Jang, Y Cun, L Ozretić, G Kong, F Leenders, X Lu, ... Nature 524 (7563), 47-53, 2015	2183	2015
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels MH Schulz, DR Zerbino, M Vingron, E Birney Bioinformatics 28 (8), 1086-1092, 2012	1735	2012
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome M Sultan, MH Schulz, H Richard, A Magen, A Klingenhoff, M Scherf, ... Science 321 (5891), 956-960, 2008	1601	2008
IntAct: an open source molecular interaction database H Hermjakob, L Montecchi‐Palazzi, C Lewington, S Mudali, S Kerrien, ... Nucleic acids research 32 (suppl_1), D452-D455, 2004	1204	2004
Histone modification levels are predictive for gene expression R Karlić, HR Chung, J Lasserre, K Vlahoviček, M Vingron Proceedings of the National Academy of Sciences 107 (7), 2926-2931, 2010	933	2010
Formation of new chromatin domains determines pathogenicity of genomic duplications M Franke, DM Ibrahim, G Andrey, W Schwarzer, V Heinrich, R Schöpflin, ... Nature 538 (7624), 265-269, 2016	718	2016
Ontologizer 2.0—a multifunctional tool for GO term enrichment analysis and data exploration S Bauer, S Grossmann, M Vingron, PN Robinson Bioinformatics 24 (14), 1650-1651, 2008	577	2008
The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ... Cell 167 (5), 1145-1149, 2016	546	2016
The translational landscape of the human heart S van Heesch, F Witte, V Schneider-Lunitz, JF Schulz, E Adami, AB Faber, ... Cell 178 (1), 242-260. e29, 2019	509	2019
T cells become licensed in the lung to enter the central nervous system F Odoardi, C Sie, K Streyl, VK Ulaganathan, C Schläger, D Lodygin, ... Nature 488 (7413), 675-679, 2012	485	2012
Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP–binding domains K Römisch, J Webb, J Herz, S Prehn, R Frank, M Vingron, B Dobberstein Nature 340 (6233), 478-482, 1989	467	1989
Correspondence analysis applied to microarray data K Fellenberg, NC Hauser, B Brors, A Neutzner, JD Hoheisel, M Vingron Proceedings of the National Academy of Sciences 98 (19), 10781-10786, 2001	446	2001
Improved detection of overrepresentation of Gene-Ontology annotations with parent–child analysis S Grossmann, S Bauer, PN Robinson, M Vingron Bioinformatics 23 (22), 3024-3031, 2007	429	2007
Evaluation of methods for modeling transcription factor sequence specificity MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ... Nature biotechnology 31 (2), 126-134, 2013	416	2013
BLUEPRINT to decode the epigenetic signature written in blood D Adams, L Altucci, SE Antonarakis, J Ballesteros, S Beck, A Bird, C Bock, ... Nature biotechnology 30 (3), 224-226, 2012	388	2012
Modeling amino acid replacement T Müller, M Vingron Journal of Computational Biology 7 (6), 761-776, 2000	382	2000

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