Computational segmentation of collagen fibers from second-harmonic generation images of breast cancer JS Bredfeldt, Y Liu, CA Pehlke, MW Conklin, JM Szulczewski, DR Inman, ... Journal of biomedical optics 19 (1), 016007-016007, 2014 | 419 | 2014 |
Automated quantification of aligned collagen for human breast carcinoma prognosis JS Bredfeldt, Y Liu, MW Conklin, PJ Keely, TR Mackie, KW Eliceiri Journal of pathology informatics 5 (1), 28, 2014 | 234 | 2014 |
Highly aligned stromal collagen is a negative prognostic factor following pancreatic ductal adenocarcinoma resection CR Drifka, AG Loeffler, K Mathewson, A Keikhosravi, JC Eickhoff, Y Liu, ... Oncotarget 7 (46), 76197, 2016 | 231 | 2016 |
A subset of myofibroblastic cancer-associated fibroblasts regulate collagen fiber elongation, which is prognostic in multiple cancers CJ Hanley, F Noble, M Ward, M Bullock, C Drifka, M Mellone, ... Oncotarget 7 (5), 6159, 2016 | 198 | 2016 |
Methods for quantifying fibrillar collagen alignment Y Liu, A Keikhosravi, GS Mehta, CR Drifka, KW Eliceiri Fibrosis: methods and protocols, 429-451, 2017 | 177 | 2017 |
Periductal stromal collagen topology of pancreatic ductal adenocarcinoma differs from that of normal and chronic pancreatitis CR Drifka, J Tod, AG Loeffler, Y Liu, GJ Thomas, KW Eliceiri, WJ Kao Modern Pathology 28 (11), 1470-1480, 2015 | 150 | 2015 |
Elevated collagen-I augments tumor progressive signals, intravasation and metastasis of prolactin-induced estrogen receptor alpha positive mammary tumor cells CE Barcus, KA O’Leary, JL Brockman, DE Rugowski, Y Liu, N Garcia, ... Breast Cancer Research 19, 1-13, 2017 | 149 | 2017 |
Collagen Alignment as a Predictor of Recurrence after Ductal Carcinoma In Situ MW Conklin, RE Gangnon, BL Sprague, L Van Gemert, JM Hampton, ... Cancer Epidemiology, Biomarkers & Prevention 27 (2), 138-145, 2018 | 135 | 2018 |
Matrix metalloproteinase 9 modulates collagen matrices and wound repair DC LeBert, JM Squirrell, J Rindy, E Broadbridge, Y Lui, A Zakrzewska, ... Development 142 (12), 2136-2146, 2015 | 131 | 2015 |
The action of discoidin domain receptor 2 in basal tumor cells and stromal cancer-associated fibroblasts is critical for breast cancer metastasis CAS Corsa, A Brenot, WR Grither, S Van Hove, AJ Loza, K Zhang, ... Cell reports 15 (11), 2510-2523, 2016 | 102 | 2016 |
Comparison of picrosirius red staining with second harmonic generation imaging for the quantification of clinically relevant collagen fiber features in histopathology samples CR Drifka, AG Loeffler, K Mathewson, G Mehta, A Keikhosravi, Y Liu, ... Journal of Histochemistry & Cytochemistry 64 (9), 519-529, 2016 | 95 | 2016 |
Extraction of optical properties and prediction of light distribution in rat brain tissue M Azimipour, R Baumgartner, Y Liu, SL Jacques, K Eliceiri, R Pashaie Journal of biomedical optics 19 (7), 075001-075001, 2014 | 77 | 2014 |
OptogenSIM: a 3D Monte Carlo simulation platform for light delivery design in optogenetics Y Liu, SL Jacques, M Azimipour, JD Rogers, R Pashaie, KW Eliceiri Biomedical optics express 6 (12), 4859-4870, 2015 | 71 | 2015 |
Navigating the collagen jungle: the biomedical potential of fiber organization in cancer JN Ouellette, CR Drifka, KB Pointer, Y Liu, TJ Lieberthal, WJ Kao, JS Kuo, ... Bioengineering 8 (2), 17, 2021 | 68 | 2021 |
Online probabilistic assessment of operating performance based on safety and optimality indices for multimode industrial processes L Ye, Y Liu, Z Fei, J Liang Industrial & engineering chemistry research 48 (24), 10912-10923, 2009 | 62 | 2009 |
Fibrillar collagen quantification with curvelet transform based computational methods Y Liu, A Keikhosravi, CA Pehlke, JS Bredfeldt, M Dutson, H Liu, GS Mehta, ... Frontiers in bioengineering and biotechnology 8, 198, 2020 | 61 | 2020 |
Quantification of collagen organization in histopathology samples using liquid crystal based polarization microscopy A Keikhosravi, Y Liu, C Drifka, KM Woo, A Verma, R Oldenbourg, ... Biomedical optics express 8 (9), 4243-4256, 2017 | 61 | 2017 |
Collagen organization of renal cell carcinoma differs between low and high grade tumors SL Best, Y Liu, A Keikhosravi, CR Drifka, KM Woo, GS Mehta, M Altwegg, ... Bmc Cancer 19, 1-8, 2019 | 59 | 2019 |
SHARPIN regulates collagen architecture and ductal outgrowth in the developing mouse mammary gland E Peuhu, R Kaukonen, M Lerche, M Saari, C Guzmán, P Rantakari, ... The EMBO Journal 36 (2), 165-182, 2017 | 50 | 2017 |
Quantitative histopathology of stained tissues using color spatial light interference microscopy (cSLIM) H Majeed, A Keikhosravi, ME Kandel, TH Nguyen, Y Liu, ... Scientific reports 9 (1), 14679, 2019 | 46 | 2019 |