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Yuming Liu
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Computational segmentation of collagen fibers from second-harmonic generation images of breast cancer
JS Bredfeldt, Y Liu, CA Pehlke, MW Conklin, JM Szulczewski, DR Inman, ...
Journal of biomedical optics 19 (1), 016007-016007, 2014
4192014
Automated quantification of aligned collagen for human breast carcinoma prognosis
JS Bredfeldt, Y Liu, MW Conklin, PJ Keely, TR Mackie, KW Eliceiri
Journal of pathology informatics 5 (1), 28, 2014
2342014
Highly aligned stromal collagen is a negative prognostic factor following pancreatic ductal adenocarcinoma resection
CR Drifka, AG Loeffler, K Mathewson, A Keikhosravi, JC Eickhoff, Y Liu, ...
Oncotarget 7 (46), 76197, 2016
2312016
A subset of myofibroblastic cancer-associated fibroblasts regulate collagen fiber elongation, which is prognostic in multiple cancers
CJ Hanley, F Noble, M Ward, M Bullock, C Drifka, M Mellone, ...
Oncotarget 7 (5), 6159, 2016
1982016
Methods for quantifying fibrillar collagen alignment
Y Liu, A Keikhosravi, GS Mehta, CR Drifka, KW Eliceiri
Fibrosis: methods and protocols, 429-451, 2017
1772017
Periductal stromal collagen topology of pancreatic ductal adenocarcinoma differs from that of normal and chronic pancreatitis
CR Drifka, J Tod, AG Loeffler, Y Liu, GJ Thomas, KW Eliceiri, WJ Kao
Modern Pathology 28 (11), 1470-1480, 2015
1502015
Elevated collagen-I augments tumor progressive signals, intravasation and metastasis of prolactin-induced estrogen receptor alpha positive mammary tumor cells
CE Barcus, KA O’Leary, JL Brockman, DE Rugowski, Y Liu, N Garcia, ...
Breast Cancer Research 19, 1-13, 2017
1492017
Collagen Alignment as a Predictor of Recurrence after Ductal Carcinoma In Situ
MW Conklin, RE Gangnon, BL Sprague, L Van Gemert, JM Hampton, ...
Cancer Epidemiology, Biomarkers & Prevention 27 (2), 138-145, 2018
1352018
Matrix metalloproteinase 9 modulates collagen matrices and wound repair
DC LeBert, JM Squirrell, J Rindy, E Broadbridge, Y Lui, A Zakrzewska, ...
Development 142 (12), 2136-2146, 2015
1312015
The action of discoidin domain receptor 2 in basal tumor cells and stromal cancer-associated fibroblasts is critical for breast cancer metastasis
CAS Corsa, A Brenot, WR Grither, S Van Hove, AJ Loza, K Zhang, ...
Cell reports 15 (11), 2510-2523, 2016
1022016
Comparison of picrosirius red staining with second harmonic generation imaging for the quantification of clinically relevant collagen fiber features in histopathology samples
CR Drifka, AG Loeffler, K Mathewson, G Mehta, A Keikhosravi, Y Liu, ...
Journal of Histochemistry & Cytochemistry 64 (9), 519-529, 2016
952016
Extraction of optical properties and prediction of light distribution in rat brain tissue
M Azimipour, R Baumgartner, Y Liu, SL Jacques, K Eliceiri, R Pashaie
Journal of biomedical optics 19 (7), 075001-075001, 2014
772014
OptogenSIM: a 3D Monte Carlo simulation platform for light delivery design in optogenetics
Y Liu, SL Jacques, M Azimipour, JD Rogers, R Pashaie, KW Eliceiri
Biomedical optics express 6 (12), 4859-4870, 2015
712015
Navigating the collagen jungle: the biomedical potential of fiber organization in cancer
JN Ouellette, CR Drifka, KB Pointer, Y Liu, TJ Lieberthal, WJ Kao, JS Kuo, ...
Bioengineering 8 (2), 17, 2021
682021
Online probabilistic assessment of operating performance based on safety and optimality indices for multimode industrial processes
L Ye, Y Liu, Z Fei, J Liang
Industrial & engineering chemistry research 48 (24), 10912-10923, 2009
622009
Fibrillar collagen quantification with curvelet transform based computational methods
Y Liu, A Keikhosravi, CA Pehlke, JS Bredfeldt, M Dutson, H Liu, GS Mehta, ...
Frontiers in bioengineering and biotechnology 8, 198, 2020
612020
Quantification of collagen organization in histopathology samples using liquid crystal based polarization microscopy
A Keikhosravi, Y Liu, C Drifka, KM Woo, A Verma, R Oldenbourg, ...
Biomedical optics express 8 (9), 4243-4256, 2017
612017
Collagen organization of renal cell carcinoma differs between low and high grade tumors
SL Best, Y Liu, A Keikhosravi, CR Drifka, KM Woo, GS Mehta, M Altwegg, ...
Bmc Cancer 19, 1-8, 2019
592019
SHARPIN regulates collagen architecture and ductal outgrowth in the developing mouse mammary gland
E Peuhu, R Kaukonen, M Lerche, M Saari, C Guzmán, P Rantakari, ...
The EMBO Journal 36 (2), 165-182, 2017
502017
Quantitative histopathology of stained tissues using color spatial light interference microscopy (cSLIM)
H Majeed, A Keikhosravi, ME Kandel, TH Nguyen, Y Liu, ...
Scientific reports 9 (1), 14679, 2019
462019
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Articles 1–20