| scIGANs: single-cell RNA-seq imputation using generative adversarial networks Y Xu, Z Zhang, L You, J Liu, Z Fan, X Zhou Nucleic Acids Research, 2020 | 116 | 2020 |
| Machine learning meets omics: applications and perspectives R Li, L Li, Y Xu, J Yang Briefings in Bioinformatics, bbab460, 2021 | 75 | 2021 |
| Deep learning of the splicing (epi) genetic code reveals a novel candidate mechanism linking histone modifications to ESC fate decision Y Xu, Y Wang, J Luo, W Zhao, X Zhou Nucleic acids research 45 (21), 12100-12112, 2017 | 71 | 2017 |
| A novel insight into Gene Ontology semantic similarity Y Xu, M Guo, W Shi, X Liu, C Wang Genomics 101 (6), 368-375, 2013 | 71 | 2013 |
| Identification of a neurocircuit underlying regulation of feeding by stress-related emotional responses Y Xu, Y Lu, RM Cassidy, LR Mangieri, C Zhu, X Huang, Z Jiang, ... Nature communications 10 (1), 1-16, 2019 | 61 | 2019 |
| Alternative splicing links histone modifications to stem cell fate decision Y Xu, W Zhao, SD Olson, KS Prabhakara, X Zhou Genome biology 19 (1), 1-21, 2018 | 61 | 2018 |
| Genome-wide association and mechanistic studies indicate that immune response contributes to Alzheimer’s disease development C Liu, J Chyr, W Zhao, Y Xu, Z Ji, H Tan, C Soto, X Zhou, ... Frontiers in genetics 9, 410, 2018 | 45 | 2018 |
| Inferring the soybean (Glycine max) microRNA functional network based on target gene network Y Xu, M Guo, X Liu, C Wang, Y Liu Bioinformatics 30 (1), 94-103, 2014 | 41 | 2014 |
| Integrative analysis of DNA methylation and gene expression profiles identifies MIR4435-2HG as an oncogenic lncRNA for glioma progression Z Li, H Tan, W Zhao, Y Xu, Z Zhang, M Wang, X Zhou Gene 715, 144012, 2019 | 31 | 2019 |
| Machine Learning and Graph Analytics in Computational Biomedicine Q Zou, L Chen, T Huang, Z Zhang, Y Xu Artificial Intelligence in Medicine, https://doi.org/10.1016/j.artmed.2017.09, 2017 | 31 | 2017 |
| Scalable data mining algorithms in computational biology and biomedicine Q Zou, D Mrozek, Q Ma, Y Xu BioMed research international 2017, 2017 | 26 | 2017 |
| Identify bilayer modules via pseudo-3D clustering: applications to miRNA-gene bilayer networks Y Xu, M Guo, X Liu, C Wang, Y Liu, G Liu Nucleic Acids Research 44 (20), e152, 2016 | 26 | 2016 |
| Applications of Single-Cell Sequencing for Multiomics Y Xu, X Zhou Methods in Molecular Biology 1754 (Computational Systems Biology), 327-374, 2018 | 20 | 2018 |
| SoyFN: a knowledge database of soybean functional networks Y Xu, M Guo, X Liu, C Wang, Y Liu Database 2014, 2014 | 18 | 2014 |
| Detecting allele-specific alternative splicing from population-scale RNA-seq data L Demirdjian, Y Xu, E Bahrami-Samani, Y Pan, S Stein, Z Xie, E Park, ... The American Journal of Human Genetics 107 (3), 461-472, 2020 | 17 | 2020 |
| Progress of the Research on Plant Drought-resistant Mechanism and Related Genes Y Xu, Y Zhan Biotechnology Bulletin 2, 005, 2009 | 15* | 2009 |
| Immune-associated gene signatures serve as a promising biomarker of immunotherapeutic prognosis for renal clear cell carcinoma Q Wang, H Tang, X Luo, J Chen, X Zhang, X Li, Y Li, Y Chen, Y Xu, S Han Frontiers in Immunology 13, 890150, 2022 | 14 | 2022 |
| Variation analysis of traits of seeds on interspecific hybrid F1 of fraxinus G Ruida, Z Fangsuo, Z Yaguang, L Shujuan, G Huijie, Z Guiqin Forest Eng 29, 39-43, 2013 | 12* | 2013 |
| DrugGPT: A GPT-based strategy for designing potential ligands targeting specific proteins Y Li, C Gao, X Song, X Wang, Y Xu, S Han bioRxiv, 2023.06. 29.543848, 2023 | 10 | 2023 |
| System-Level Insights into the Cellular Interactome of a Non-Model Organism: Inferring, Modelling and Analysing Functional Gene Network of Soybean (Glycine max) Y Xu, M Guo, Q Zou, X Liu, C Wang, Y Liu PloS ONE 9 (11), e113907, 2014 | 10 | 2014 |
Xiaobo ZhouProfessor and Fellow of AIMBE, University of Texas Health Science Center HoustonVerified email at uth.tmc.edu
