Nanoscale imaging of RNA with expansion microscopy F Chen, AT Wassie, AJ Cote, A Sinha, S Alon, S Asano, ER Daugharthy, ... Nature methods 13 (8), 679-684, 2016 | 410 | 2016 |
Trade-off between transcriptome plasticity and genome evolution in cephalopods N Liscovitch-Brauer, S Alon, HT Porath, B Elstein, R Unger, T Ziv, ... Cell 169 (2), 191-202. e11, 2017 | 324 | 2017 |
Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems S Alon, DR Goodwin, A Sinha, AT Wassie, F Chen, ER Daugharthy, ... Science 371 (6528), eaax2656, 2021 | 315 | 2021 |
Clonal decomposition and DNA replication states defined by scaled single-cell genome sequencing E Laks, A McPherson, H Zahn, D Lai, A Steif, J Brimhall, J Biele, B Wang, ... Cell 179 (5), 1207-1221. e22, 2019 | 208 | 2019 |
Systematic identification of edited microRNAs in the human brain S Alon, E Mor, F Vigneault, GM Church, F Locatelli, F Galeano, A Gallo, ... Genome research 22 (8), 1533-1540, 2012 | 201 | 2012 |
The majority of transcripts in the squid nervous system are extensively recoded by A-to-I RNA editing S Alon, SC Garrett, EY Levanon, S Olson, BR Graveley, JJC Rosenthal, ... Elife 4, e05198, 2015 | 164 | 2015 |
Barcoding bias in high-throughput multiplex sequencing of miRNA S Alon, F Vigneault, S Eminaga, DC Christodoulou, JG Seidman, ... Genome research 21 (9), 1506-1511, 2011 | 158 | 2011 |
Modulation of microRNA editing, expression and processing by ADAR2 deaminase in glioblastoma S Tomaselli, F Galeano, S Alon, S Raho, S Galardi, VA Polito, C Presutti, ... Genome biology 16, 1-19, 2015 | 154 | 2015 |
Complex diel cycles of gene expression in coral-algal symbiosis O Levy, P Kaniewska, S Alon, E Eisenberg, S Karako-Lampert, LK Bay, ... Science 331 (6014), 175-175, 2011 | 139 | 2011 |
Signaling cascades and the importance of moonlight in coral broadcast mass spawning P Kaniewska, S Alon, S Karako-Lampert, O Hoegh-Guldberg, O Levy elife 4, e09991, 2015 | 133 | 2015 |
A systematic comparison of free and bound antibodies reveals binding-related conformational changes I Sela-Culang, S Alon, Y Ofran The Journal of Immunology 189 (10), 4890-4899, 2012 | 132 | 2012 |
In situ nucleic acid sequencing of expanded biological samples ES Boyden, F Chen, S Alon, G Church, PW Tillberg, A Marblestone, ... US Patent 10,059,990, 2018 | 127 | 2018 |
ADAR2/miR-589-3p axis controls glioblastoma cell migration/invasion V Cesarini, DA Silvestris, V Tassinari, S Tomaselli, S Alon, E Eisenberg, ... Nucleic acids research 46 (4), 2045-2059, 2018 | 111 | 2018 |
Nanoscale imaging of proteins and nucleic acids via expansion microscopy A Wassie, F Chen, ES Boyden, S Alon, G Church, E Daugharthy US Patent 10,364,457, 2019 | 92 | 2019 |
The light-induced transcriptome of the zebrafish pineal gland reveals complex regulation of the circadian clockwork by light Z Ben-Moshe, S Alon, P Mracek, L Faigenbloom, A Tovin, GD Vatine, ... Nucleic acids research 42 (6), 3750-3767, 2014 | 87 | 2014 |
Multiplexed signal amplified FISH via splinted ligation amplification and sequencing F Chen, AT Wassie, S Alon, AH Marblestone, A Sinha, A Payne, ... US Patent 10,995,361, 2021 | 71 | 2021 |
Genetically blocking the zebrafish pineal clock affects circadian behavior Z Ben-Moshe Livne, S Alon, D Vallone, Y Bayleyen, A Tovin, I Shainer, ... PLoS genetics 12 (11), e1006445, 2016 | 67 | 2016 |
Hypocretin neuron-specific transcriptome profiling identifies the sleep modulator Kcnh4a L Yelin-Bekerman, I Elbaz, A Diber, D Dahary, L Gibbs-Bar, S Alon, ... Elife 4, e08638, 2015 | 56 | 2015 |
Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses S Liu, S Punthambaker, EPR Iyer, T Ferrante, D Goodwin, D Fürth, ... Nucleic acids research 49 (10), e58-e58, 2021 | 52 | 2021 |
A-to-I RNA editing in the earliest-diverging eumetazoan phyla HT Porath, AA Schaffer, P Kaniewska, S Alon, E Eisenberg, J Rosenthal, ... Molecular biology and evolution 34 (8), 1890-1901, 2017 | 52 | 2017 |