Raghothama Chaerkady
Raghothama Chaerkady
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Human protein reference database—2009 update
TS Keshava Prasad, R Goel, K Kandasamy, S Keerthikumar, S Kumar, ...
Nucleic acids research 37 (suppl_1), D767-D772, 2009
A draft map of the human proteome
MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ...
Nature 509 (7502), 575-581, 2014
Transcriptomic and proteomic profiling of KEAP1 disrupted and sulforaphane-treated human breast epithelial cells reveals common expression profiles
AS Agyeman, R Chaerkady, PG Shaw, NE Davidson, K Visvanathan, ...
Breast cancer research and treatment 132 (1), 175-187, 2012
A comprehensive map of the human urinary proteome
A Marimuthu, RN O’Meally, R Chaerkady, Y Subbannayya, V Nanjappa, ...
Journal of proteome research 10 (6), 2734-2743, 2011
Mutant proteins as cancer-specific biomarkers
Q Wang, R Chaerkady, J Wu, HJ Hwang, N Papadopoulos, L Kopelovich, ...
Proceedings of the National Academy of Sciences 108 (6), 2444-2449, 2011
Human Proteinpedia enables sharing of human protein data
S Mathivanan, M Ahmed, NG Ahn, H Alexandre, R Amanchy, PC Andrews, ...
Nature biotechnology 26 (2), 164-167, 2008
Proteomic analysis of Chinese hamster ovary cells
D Baycin-Hizal, DL Tabb, R Chaerkady, L Chen, NE Lewis, H Nagarajan, ...
Journal of proteome research 11 (11), 5265-5276, 2012
Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry
DS Kelkar, D Kumar, P Kumar, L Balakrishnan, B Muthusamy, AK Yadav, ...
Molecular & cellular proteomics 10 (12), 2011
Temporal profiling of the adipocyte proteome during differentiation using a five-plex SILAC based strategy
H Molina, Y Yang, T Ruch, JW Kim, P Mortensen, T Otto, A Nalli, QQ Tang, ...
Journal of proteome research 8 (1), 48-58, 2009
Plasma Proteome Database as a resource for proteomics research
B Muthusamy, G Hanumanthu, S Suresh, B Rekha, D Srinivas, L Karthick, ...
Proteomics 5 (13), 3531-3536, 2005
Identification of miR‐21 targets in breast cancer cells using a quantitative proteomic approach
Y Yang, R Chaerkady, MA Beer, JT Mendell, A Pandey
Proteomics 9 (5), 1374-1384, 2009
Comparisons of tyrosine phosphorylated proteins in cells expressing lung cancer-specific alleles of EGFR and KRAS
U Guha, R Chaerkady, A Marimuthu, AS Patterson, MK Kashyap, ...
Proceedings of the National Academy of Sciences 105 (37), 14112-14117, 2008
The keratoconus corneal proteome: loss of epithelial integrity and stromal degeneration
R Chaerkady, H Shao, SG Scott, A Pandey, AS Jun, S Chakravarti
Journal of proteomics 87, 122-131, 2013
A quantitative proteomic approach for identification of potential biomarkers in hepatocellular carcinoma
R Chaerkady, HC Harsha, A Nalli, M Gucek, P Vivekanandan, J Akhtar, ...
Journal of proteome research 7 (10), 4289-4298, 2008
S Renuse, R Chaerkady, A Pandey
Proteomics 11 (4), 620-630, 2011
Quantitative tissue proteomics of esophageal squamous cell carcinoma for novel biomarker discovery
H Pawar, MK Kashyap, NA Sahasrabuddhe, S Renuse, HC Harsha, ...
Cancer biology & therapy 12 (6), 510-522, 2011
Temporal profiling of the secretome during adipogenesis in humans
J Zhong, SA Krawczyk, R Chaerkady, H Huang, R Goel, JS Bader, ...
Journal of proteome research 9 (10), 5228-5238, 2010
Global impact of oncogenic Src on a phosphotyrosine proteome
W Luo, RJ Slebos, S Hill, M Li, J Brábek, R Amanchy, R Chaerkady, ...
Journal of proteome research 7 (8), 3447-3460, 2008
SILAC-based quantitative proteomic approach to identify potential biomarkers from the esophageal squamous cell carcinoma secretome
MK Kashyap, HC Harsha, S Renuse, H Pawar, NA Sahasrabuddhe, ...
Cancer biology & therapy 10 (8), 796-810, 2010
Identification of secreted proteins that mediate cell-cell interactions in an in vitro model of the lung cancer microenvironment
L Zhong, J Roybal, R Chaerkady, W Zhang, K Choi, CA Alvarez, H Tran, ...
Cancer research 68 (17), 7237-7245, 2008
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