Mohamed Helmy

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Citations	3186	2899
h-index	23	19
i10-index	33	30

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Kareem A. MosaAssociate Professor, University of Sharjah (UAE) & Al-Azhar University (Egypt)Verified email at sharjah.ac.ae
Sara El-Sayed El-MetwallyAssistant Professor, Faculty of Computers and Information, Mansoura University, Egypt.Verified email at mans.edu.eg
Kumar SelvarajooBioinformatics Institute, A*STARVerified email at bii.a-star.edu.sg
Osama M. OudaAssociate Professor of Computer Science, Jouf UniversityVerified email at ju.edu.sa
Yasushi IshihamaProfessor, Grad Schl of Pharm Sci, Kyoto UniversityVerified email at pharm.kyoto-u.ac.jp
Ahmed IsmailAssistant Professor of Health Informatics, Public health Department, College of Applied MedicalVerified email at mu.edu.sa
Mohamed AwadDepartment of Comparative Development and Genetics. Max Planck Institute for Plant Breeding ResearchVerified email at azhar.edu.eg
Naoyuki SugiyamaGraduate School of Phermaceutical Sciences, Kyoto UniversityVerified email at pharm.kyoto-u.ac.jp
Gary BaderProfessor of Molecular Genetics and Computer Science, The Donnelly Centre, University of TorontoVerified email at utoronto.ca
Om Parkash DhankherUniversity of Massachusetts AmherstVerified email at umass.edu
Kundan KumarBirla Institute of Technology & Science Pilani, K. K. Birla Goa CampusVerified email at goa.bits-pilani.ac.in
Ismail SaadounUniversity of SharjahVerified email at sharjah.ac.ae
Paul C. BoutrosUniversity of California, Los AngelesVerified email at mednet.ucla.edu
Jun-ichiro InoueThe Institute of Medical Science, The University of TokyoVerified email at ims.u-tokyo.ac.jp
Iyad SultanKing Hussein Cancer CenterVerified email at khcc.jo
Iman A BashetiDean of Faculty of Pharmacy, Professor in Clinical Pharmacy, Applied Science Private UniversityVerified email at asu.edu.jo
fawzy El-FekyProfessor of Biotechnology and Genetics. Biotechnology Sept. , Al-Azhar universityVerified email at azhar.edu.eg
David Mas-PontePhD Student, IRB, BarcelonaVerified email at irbbarcelona.org
Andrés LanzósData Scientist at BiognosysVerified email at runbox.com
Jakob Skou PedersenProfessor at Department of Molecular Medicine, Aarhus UniversityVerified email at ki.au.dk

Mohamed Helmy

Research Scientist at Bioinformatics Institute (BII), A*STAR

Verified email at bii.a-star.edu.sg - Homepage

Systems Biology Bioinformatics Cancer Genomics Proteogenomics Personalized Medicine


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	964*	2020
A reference map of the human binary protein interactome K Luck, DK Kim, L Lambourne, K Spirohn, BE Begg, W Bian, R Brignall, ... Nature 580 (7803), 402-408, 2020	420	2020
Potential biotechnological strategies for the cleanup of heavy metals and metalloids KA Mosa, I Saadoun, K Kumar, M Helmy, OP Dhankher Frontiers in plant science 7, 303, 2016	308	2016
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020	303	2020
Next-generation sequence assembly: four stages of data processing and computational challenges S El-Metwally, T Hamza, M Zakaria, M Helmy PLoS computational biology 9 (12), e1003345, 2013	169	2013
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis J Carlevaro-Fita, A Lanzós, L Feuerbach, C Hong, D Mas-Ponte, ... Communications biology 3 (1), 1-16, 2020	96	2020
Limited resources of genome sequencing in developing countries: challenges and solutions M Helmy, M Awad, KA Mosa Applied & translational genomics 9, 15-19, 2016	81	2016
OryzaPG-DB: rice proteome database based on shotgun proteogenomics M Helmy, M Tomita, Y Ishihama BMC plant biology 11 (1), 1-9, 2011	74	2011
Integrative pathway enrichment analysis of multivariate omics data M Paczkowska, J Barenboim, N Sintupisut, NS Fox, H Zhu, D Abd-Rabbo, ... Nature communications 11 (1), 1-16, 2020	66	2020
Next generation sequencing technologies and challenges in sequence assembly S El-Metwally, OM Ouda, M Helmy Springer-Nature, 2014	65	2014
Signaling flux redistribution at toll-like receptor pathway junctions K Selvarajoo, Y Takada, J Gohda, M Helmy, S Akira, M Tomita, ... PLoS One 3 (10), e3430, 2008	59	2008
Pathway and network analysis of more than 2500 whole cancer genomes MA Reyna, D Haan, M Paczkowska, LPC Verbeke, M Vazquez, ... Nature communications 11 (1), 1-17, 2020	56	2020
A high rate of COVID-19 vaccine hesitancy in a large-scale survey on Arabs EA Qunaibi, M Helmy, I Basheti, I Sultan Elife 10, 2021	50	2021
Predicting novel features of toll-like receptor 3 signaling in macrophages M Helmy, J Gohda, J Inoue, M Tomita, M Tsuchiya, K Selvarajoo PLoS One 4 (3), e4661, 2009	36	2009
Sex differences in oncogenic mutational processes CH Li, SD Prokopec, RX Sun, F Yousif, N Schmitz, PC Boutros Nature communications 11 (1), 1-24, 2020	34	2020
Mass spectrum sequential subtraction speeds up searching large peptide MS/MS spectra datasets against large nucleotide databases for proteogenomics M Helmy, N Sugiyama, M Tomita, Y Ishihama Genes to Cells 17 (8), 633-644, 2012	31	2012
Omics and system biology approaches in plant stress research KA Mosa, A Ismail, M Helmy Plant stress tolerance, 21-34, 2017	29	2017
Plant Stress Tolerance An Integrated Omics Approach KA Mosa, A Ismail, M Helmy Springer Nature, 2016	29	2016
Introduction to plant stresses KA Mosa, A Ismail, M Helmy Plant stress tolerance, 1-19, 2017	28	2017
Ten simple rules for developing public biological databases M Helmy, A Crits-Christoph, GD Bader PLoS computational biology 12 (11), e1005128, 2016	27	2016

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