Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism K Arora, CL Brooks III Proceedings of the National Academy of Sciences 104 (47), 18496-18501, 2007 | 277 | 2007 |
Critical role of magnesium ions in DNA polymerase β's closing and active site assembly L Yang, K Arora, WA Beard, SH Wilson, T Schlick Journal of the american chemical society 126 (27), 8441-8453, 2004 | 185 | 2004 |
Regulation of DNA repair fidelity by molecular checkpoints:“gates” in DNA polymerase β's substrate selection R Radhakrishnan, K Arora, Y Wang, WA Beard, SH Wilson, T Schlick Biochemistry 45 (51), 15142-15156, 2006 | 80 | 2006 |
Mismatch-induced conformational distortions in polymerase β support an induced-fit mechanism for fidelity K Arora, WA Beard, SH Wilson, T Schlick Biochemistry 44 (40), 13328-13341, 2005 | 72 | 2005 |
Functionally important conformations of the Met20 loop in dihydrofolate reductase are populated by rapid thermal fluctuations K Arora, CL Brooks Iii Journal of the American Chemical Society 131 (15), 5642-5647, 2009 | 71 | 2009 |
In Silico Evidence for DNA Polymerase- β’s Substrate-Induced Conformational Change K Arora, T Schlick Biophysical journal 87 (5), 3088-3099, 2004 | 58 | 2004 |
Harmonic Fourier beads method for studying rare events on rugged energy surfaces IV Khavrutskii, K Arora, CL Brooks The Journal of chemical physics 125 (17), 2006 | 50 | 2006 |
Deoxyadenosine sugar puckering pathway simulated by the stochastic difference equation algorithm K Arora, T Schlick Chemical physics letters 378 (1-2), 1-8, 2003 | 47 | 2003 |
Perspective: pre-chemistry conformational changes in DNA polymerase mechanisms T Schlick, K Arora, WA Beard, SH Wilson Theoretical chemistry accounts 131, 1-8, 2012 | 40 | 2012 |
Conformational transition pathway of polymerase β/DNA upon binding correct incoming substrate K Arora, T Schlick The Journal of Physical Chemistry B 109 (11), 5358-5367, 2005 | 39 | 2005 |
Multiple intermediates, diverse conformations, and cooperative conformational changes underlie the catalytic hydride transfer reaction of dihydrofolate reductase K Arora, CL Brooks Dynamics in enzyme catalysis, 165-187, 2013 | 29 | 2013 |
Modulation of frustration in folding by sequence permutation RP Nobrega, K Arora, SV Kathuria, R Graceffa, RA Barrea, L Guo, ... Proceedings of the National Academy of Sciences 111 (29), 10562-10567, 2014 | 28 | 2014 |
Subtle but variable conformational rearrangements in the replication cycle of Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) may accommodate lesion bypass Y Wang, K Arora, T Schlick Protein science 15 (1), 135-151, 2006 | 27 | 2006 |
Conformational dynamics in human purine nucleoside phosphorylase with reactants and transition-state analogues JS Hirschi, K Arora, CL Brooks III, VL Schramm The Journal of Physical Chemistry B 114 (49), 16263-16272, 2010 | 26 | 2010 |
K+/Na+ Selectivity in Toy Cation Binding Site Models Is Determined by the ‘Host’ DL Bostick, K Arora, CL Brooks III Biophysical journal 96 (10), 3887-3896, 2009 | 25 | 2009 |
Mismatched base-pair simulations for ASFV pol X/DNA complexes help interpret frequent G• G misincorporation BAS Benítez, K Arora, L Balistreri, T Schlick Journal of molecular biology 384 (5), 1086-1097, 2008 | 24 | 2008 |
Hexameric helicase deconstructed: interplay of conformational changes and substrate coupling K Yoshimoto, K Arora, CL Brooks Biophysical journal 98 (8), 1449-1457, 2010 | 22 | 2010 |
pH-induced stability switching of the bacteriophage HK97 maturation pathway ER May, K Arora, CL Brooks III Journal of the American Chemical Society 136 (8), 3097-3107, 2014 | 21 | 2014 |
Frustration and folding of a TIM barrel protein KT Halloran, Y Wang, K Arora, S Chakravarthy, TC Irving, O Bilsel, ... Proceedings of the National Academy of Sciences 116 (33), 16378-16383, 2019 | 20 | 2019 |
Regulation of calreticulin–major histocompatibility complex (MHC) class I interactions by ATP SJ Wijeyesakere, JK Gagnon, K Arora, CL Brooks III, M Raghavan Proceedings of the National Academy of Sciences 112 (41), E5608-E5617, 2015 | 20 | 2015 |