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Jonas Fischer
Jonas Fischer
Postdoctoral Fellow, Harvard University
Verified email at hsph.harvard.edu
Title
Cited by
Cited by
Year
Federated learning from small datasets
M Kamp, J Fischer, J Vreeken
arXiv preprint arXiv:2110.03469, 2021
342021
Plant'n'Seek: Can You Find the Winning Ticket?
J Fischer, R Burkholz
arXiv preprint arXiv:2111.11153, 2021
222021
Sets of robust rules, and how to find them
J Fischer, J Vreeken
Joint European Conference on Machine Learning and Knowledge Discovery in …, 2019
222019
Differentiable Pattern Set Mining
J Fischer, J Vreeken
Proceedings of the 27th ACM SIGKDD Conference on Knowledge Discovery & Data …, 2021
162021
Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters
F Behjati Ardakani, K Kattler, K Nordström, N Gasparoni, G Gasparoni, ...
Epigenetics & chromatin 11 (1), 1-14, 2018
142018
Towards strong pruning for lottery tickets with non-zero biases
J Fischer, R Burkholz
arXiv preprint arXiv:2110.11150, 2021
132021
Discovering succinct pattern sets expressing co-occurrence and mutual exclusivity
J Fischer, J Vreeken
Proceedings of the 26th ACM SIGKDD International Conference on Knowledge …, 2020
112020
Label-Descriptive Patterns and Their Application to Characterizing Classification Errors
MA Hedderich, J Fischer, D Klakow, J Vreeken
International Conference on Machine Learning, 8691-8707, 2022
82022
What’s in the Box? Exploring the Inner Life of Neural Networks with Robust Rules
J Fischer, A Oláh, J Vreeken
International Conference on Machine Learning, 3352-3362, 2021
82021
Gene regulatory networks reveal sex difference in lung adenocarcinoma
E Saha, M Ben Guebila, V Fanfani, J Fischer, KH Shutta, P Mandros, ...
Biology of Sex Differences 15 (1), 62, 2024
52024
Lottery Tickets with Nonzero Biases
J Fischer, A Gadhikar, R Burkholz
arXiv preprint arXiv:2110.11150, 2021
32021
Finding interpretable class-specific patterns through efficient neural search
NP Walter, J Fischer, J Vreeken
Proceedings of the AAAI Conference on Artificial Intelligence 38 (8), 9062-9070, 2024
22024
Biologically informed NeuralODEs for genome-wide regulatory dynamics
I Hossain, V Fanfani, J Quackenbush, R Burkholz
bioRxiv, 2023.02. 24.529835, 2023
22023
Bayesian Optimized sample-specific Networks Obtained By Omics data (BONOBO)
E Saha, V Fanfani, P Mandros, M Ben-Guebila, J Fischer, KH Shutta, ...
bioRxiv, 2023.11. 16.567119, 2023
22023
Estimating Mutual Information via Geodesic kNN
A Marx, J Fischer
Proceedings of the 2022 SIAM International Conference on Data Mining (SDM …, 2022
22022
Preserving local densities in low-dimensional embeddings
J Fischer, R Burkholz, J Vreeken
arXiv preprint arXiv:2301.13732, 2023
12023
Factoring out prior knowledge from low-dimensional embeddings
E Heiter, J Fischer, J Vreeken
arXiv preprint arXiv:2103.01828, 2021
12021
Bayesian inference of sample-specific coexpression networks
E Saha, V Fanfani, P Mandros, MB Guebila, J Fischer, KH Shutta, ...
Genome Research, gr. 279117.124, 2024
2024
Sailing in high-dimensional spaces: Low-dimensional embeddings through angle preservation
J Fischer, R Ma
arXiv preprint arXiv:2406.09876, 2024
2024
BONOBO: Bayesian Optimized Sample-Specific Networks Obtained by Omics Data
E Saha, V Fanfani, P Mandros, M Ben-Guebila, J Fischer, KH Shutta, ...
International Conference on Research in Computational Molecular Biology, 328-331, 2024
2024
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