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Chloe Hsu
Chloe Hsu
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Year
Learning inverse folding from millions of predicted structures
C Hsu, R Verkuil, J Liu, Z Lin, B Hie, T Sercu, A Lerer, A Rives
International Conference on Machine Learning, 8946--8970, 2022
3712022
Learning protein fitness models from evolutionary and assay-labeled data
C Hsu, H Nisonoff, C Fannjiang, J Listgarten
Nature biotechnology 40 (7), 1114-1122, 2022
201*2022
Revisiting design choices in proximal policy optimization
CCY Hsu, C Mendler-Dünner, M Hardt
NeurIPS 2020 Workshop: Challenges of Real-World RL, 2020
792020
in Proceedings of the 39th International Conference on Machine Learning
C Hsu, R Verkuil, J Liu, Z Lin, B Hie, T Sercu, A Lerer, A Rives
332022
Learning inverse folding from millions of predicted structures. bioRxiv (2022)
C Hsu, R Verkuil, J Liu, Z Lin, B Hie, T Sercu, A Lerer, A Rives
preprint, 2022
112022
The prism manifold realization problem
W Ballinger, C Hsu, W Mackey, Y Ni, T Ochse, F Vafaee
Algebraic & Geometric Topology 20 (2), 757-816, 2020
102020
Generative models for protein structures and sequences
C Hsu, C Fannjiang, J Listgarten
nature biotechnology 42 (2), 196-199, 2024
82024
Linear dynamics: Clustering without identification
C Hsu, M Hardt, M Hardt
International Conference on Artificial Intelligence and Statistics, 918-929, 2020
72020
On multidimensional and monotone k-sum
C Hsu, C Umans
International Symposium on Mathematical Foundations of Computer Science, 2017
72017
Whynot, 2020
J Miller, C Hsu, J Troutman, J Perdomo, T Zrnic, L Liu, Y Sun, L Schmidt, ...
URL https://doi. org/10.5281/zenodo 3875775, 7, 0
6
Nanopore callers for epigenetics from limited supervised data
B Yao, C Hsu, G Goldner, Y Michaeli, Y Ebenstein, J Listgarten
bioRxiv, 2021.06. 17.448800, 2021
52021
Learning inverse folding from millions of predicted structures. bioRxiv. 2022: 2022.04. 10.487779
C Hsu, R Verkuil, J Liu, Z Lin, B Hie, T Sercu, A Lerer, A Rives
View Article, 0
5
Learning to (learn at test time)
Y Sun, X Li, K Dalal, C Hsu, S Koyejo, C Guestrin, X Wang, T Hashimoto, ...
arXiv preprint arXiv:2310.13807, 2023
22023
A fast generalized DFT for finite groups of Lie type
CCY Hsu, C Umans
Proceedings of the Twenty-Ninth Annual ACM-SIAM Symposium on Discrete …, 2018
22018
A new algorithm for fast generalized DFTs
CCY Hsu, C Umans
ACM Transactions on Algorithms (TALG) 16 (1), 1-20, 2019
12019
GENTANGLE: integrated computational design of gene entanglements
JM Martí, C Hsu, C Rochereau, C Xu, T Blazejewski, H Nisonoff, ...
Bioinformatics 40 (7), btae380, 2024
2024
Effective training of nanopore callers for epigenetic marks with limited labelled data
B Yao, C Hsu, G Goldner, Y Michaeli, Y Ebenstein, J Listgarten
Open Biology 14 (6), 230449, 2024
2024
Learning antibody sequence constraints from allelic inclusion
M Jagota, C Hsu, T Mazumder, K Sung, WS DeWitt, J Listgarten, ...
bioRxiv, 2024.10. 22.619760, 2024
2024
Learning to Design and Engineer Proteins from Evolution, 3D Structures, and Experiments
C Hsu
UC Berkeley, 2023
2023
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Articles 1–19