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Xingpeng Jiang
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Year
Sequence clustering in bioinformatics: an empirical study
Q Zou, G Lin, X Jiang, X Liu, X Zeng
Briefings in bioinformatics 21 (1), 1-10, 2020
2242020
Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm
A Bartram, X Jiang, M Lynch, A Masella, G Nicol, J Dushoff, J Neufeld
FEMS Microbiology Ecology 87 (2), 403-415, 2013
1802013
Meta-analysis of the association between the monoamine oxidase-A gene and mood disorders
M Fan, B Liu, T Jiang, X Jiang, H Zhao, J Zhang
Psychiatric genetics 20 (1), 1-7, 2010
1202010
Modularity in the genetic disease-phenotype network
X Jiang, B Liu, J Jiang, H Zhao, M Fan, J Zhang, Z Fan, T Jiang
FEBS letters 582 (17), 2549-2554, 2008
572008
Discovering communities in complex networks by edge label propagation
W Liu, X Jiang, M Pellegrini, X Wang
Scientific reports 6 (1), 22470, 2016
542016
Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factorization
X Jiang, MGI Langille, RY Neches, M Elliot, SA Levin, JA Eisen, JS Weitz, ...
PLoS ONE 7 (9), e43866, 2012
532012
A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data
X Jiang, JS Weitz, J Dushoff
Journal of Mathematical Biology 64 (4), 697-711, 2012
342012
Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network
X Shen, L Yi, X Jiang, Y Zhao, X Hu, T He, J Yang
Methods 110, 90-96, 2016
322016
Predicting virus-host association by Kernelized logistic matrix factorization and similarity network fusion
D Liu, Y Ma, X Jiang, T He
BMC bioinformatics 20, 1-10, 2019
292019
Visualization of genetic disease-phenotype similarities by multiple maps t-SNE with Laplacian regularization
W Xu, X Jiang, X Hu, G Li
BMC medical genomics 7, 1-9, 2014
292014
Exploring candidate genes for human brain diseases from a brain-specific gene network
B Liu, T Jiang, S Ma, H Zhao, J Li, X Jiang, J Zhang
Biochemical and biophysical research communications 349 (4), 1308-1314, 2006
292006
Hessian regularization based symmetric nonnegative matrix factorization for clustering gene expression and microbiome data
Y Ma, X Hu, T He, X Jiang
Methods 111, 80-84, 2016
262016
Graph embedding deep learning guides microbial biomarkers' identification
Q Zhu, X Jiang, Q Zhu
Frontiers in genetics 10, 491009, 2019
232019
Microbiome Data Representation by Joint Nonnegative Matrix Factorization with Laplacian Regularization
X Jiang, X Hu, W Xu
IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (2 …, 2017
222017
Multi-view clustering of microbiome samples by robust similarity network fusion and spectral clustering
Y Zhang, X Hu, X Jiang
IEEE/ACM transactions on computational biology and bioinformatics 14 (2 …, 2015
222015
A systems biology-based gene expression classifier of glioblastoma predicts survival with solid tumors
J Zhang, B Liu, X Jiang, H Zhao, M Fan, Z Fan, JJ Lee, T Jiang, T Jiang, ...
PLoS One 4 (7), e6274, 2009
222009
Predicting disease-microbe association by random walking on the heterogeneous network
X Shen, Y Chen, X Jiang, X Hu, T He, J Yang
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016
202016
Mining temporal protein complex based on the dynamic pin weighted with connected affinity and gene co-expression
X Shen, L Yi, X Jiang, T He, X Hu, J Yang
PloS one 11 (4), e0153967, 2016
202016
Bacterial named entity recognition based on dictionary and conditional random field
X Wang, X Jiang, M Liu, T He, X Hu
2017 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2017
182017
MiRNA-disease interaction prediction based on kernel neighborhood similarity and multi-network bidirectional propagation
Y Ma, T He, L Ge, C Zhang, X Jiang
BMC Medical Genomics 12, 1-14, 2019
172019
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Articles 1–20