Efficient architecture-aware acceleration of BWA-MEM for multicore systems M Vasimuddin, S Misra, H Li, S Aluru 2019 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2019 | 196 | 2019 |

Benchmarking learned indexes R Marcus, A Kipf, A van Renen, M Stoian, S Misra, A Kemper, T Neumann, ... arXiv preprint arXiv:2006.12804, 2020 | 76 | 2020 |

Lung cancer survival prediction using ensemble data mining on SEER data A Agrawal, S Misra, R Narayanan, L Polepeddi, A Choudhary Scientific Programming 20 (1), 29-42, 2012 | 64 | 2012 |

A lung cancer outcome calculator using ensemble data mining on SEER data A Agrawal, S Misra, R Narayanan, L Polepeddi, A Choudhary Proceedings of the tenth international workshop on data mining in …, 2011 | 61 | 2011 |

Temperature-aware test scheduling for multiprocessor systems-on-chip DR Bild, S Misra, T Chantemy, P Kumar, RP Dick, XS Huy, L Shangz, ... 2008 IEEE/ACM International Conference on Computer-Aided Design, 59-66, 2008 | 51 | 2008 |

Distgnn: Scalable distributed training for large-scale graph neural networks V Md, S Misra, G Ma, R Mohanty, E Georganas, A Heinecke, D Kalamkar, ... Proceedings of the International Conference for High Performance Computing …, 2021 | 45 | 2021 |

Anatomy of a hash-based long read sequence mapping algorithm for next generation DNA sequencing S Misra, A Agrawal, W Liao, A Choudhary Bioinformatics 27 (2), 189-195, 2011 | 43 | 2011 |

The case for a learned sorting algorithm A Kristo, K Vaidya, U Çetintemel, S Misra, T Kraska Proceedings of the 2020 ACM SIGMOD International Conference on Management of …, 2020 | 37 | 2020 |

Accelerating sequence alignment to graphs C Jain, S Misra, H Zhang, A Dilthey, S Aluru 2019 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2019 | 37 | 2019 |

An efficient FPGA implementation of principle component analysis based network intrusion detection system A Das, S Misra, S Joshi, J Zambreno, G Memik, A Choudhary Proceedings of the conference on Design, automation and test in Europe, 1160 …, 2008 | 33 | 2008 |

Accelerating data mining workloads: current approaches and future challenges in system architecture design AN Choudhary, D Honbo, P Kumar, B Ozisikyilmaz, S Misra, G Memik Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery 1 (1 …, 2011 | 27 | 2011 |

Scaling up hartree–fock calculations on tianhe-2 E Chow, X Liu, S Misra, M Dukhan, M Smelyanskiy, JR Hammond, Y Du, ... The International Journal of High Performance Computing Applications 30 (1 …, 2016 | 25 | 2016 |

Accelerating pairwise statistical significance estimation for local alignment by harvesting GPU's power Y Zhang, S Misra, A Agrawal, MMA Patwary, W Liao, Z Qin, A Choudhary BMC bioinformatics 13, 1-12, 2012 | 24 | 2012 |

Efficient pairwise statistical significance estimation for local sequence alignment using GPU Y Zhang, S Misra, D Honbo, A Agrawal, W Liao, A Choudhary 2011 IEEE 1st International Conference on Computational Advances in Bio and …, 2011 | 23 | 2011 |

Optimizing high performance distributed memory parallel hash tables for DNA k-mer counting TC Pan, S Misra, S Aluru SC18: International Conference for High Performance Computing, Networking …, 2018 | 19 | 2018 |

Parallel bayesian network structure learning for genome-scale gene networks S Misra, M Vasimuddin, K Pamnany, SP Chockalingam, Y Dong, M Xie, ... SC'14: Proceedings of the International Conference for High Performance …, 2014 | 19 | 2014 |

MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment A Agrawal, S Misra, D Honbo, A Choudhary Proceedings of the 19th ACM International Symposium on High Performance …, 2010 | 19 | 2010 |

Parallel pairwise statistical significance estimation of local sequence alignment using message passing interface library A Agrawal, S Misra, D Honbo, A Choudhary Concurrency and Computation: Practice and Experience 23 (17), 2269-2279, 2011 | 17 | 2011 |

Accelerating minimap2 for long-read sequencing applications on modern CPUs S Kalikar, C Jain, M Vasimuddin, S Misra Nature Computational Science 2 (2), 78-83, 2022 | 16* | 2022 |

Parallel mutual information based construction of whole-genome networks on the intel (r) xeon phi (tm) coprocessor S Misra, K Pamnany, S Aluru 2014 IEEE 28th International Parallel and Distributed Processing Symposium …, 2014 | 16 | 2014 |