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Tilmann Weber
Tilmann Weber
Professor / Associate Scientific Director @ DTU Biosustain, Technical University of Denmark
Verified email at biosustain.dtu.dk - Homepage
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Cited by
Year
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ...
Nucleic acids research 47 (W1), W81-W87, 2019
27892019
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
MH Medema, K Blin, P Cimermancic, V De Jager, P Zakrzewski, ...
Nucleic acids research 39 (suppl_2), W339-W346, 2011
21212011
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ...
Nucleic acids research 43 (W1), W237-W243, 2015
20722015
antiSMASH 6.0: improving cluster detection and comparison capabilities
K Blin, S Shaw, AM Kloosterman, Z Charlop-Powers, GP Van Wezel, ...
Nucleic acids research 49 (W1), W29-W35, 2021
19792021
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ...
Nucleic acids research 45 (W1), W36-W41, 2017
12742017
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ...
Nucleic acids research 41 (W1), W204-W212, 2013
9752013
Minimum information about a biosynthetic gene cluster
MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ...
Nature chemical biology 11 (9), 625-631, 2015
9022015
Towards the sustainable discovery and development of new antibiotics
M Miethke, M Pieroni, T Weber, M Brönstrup, P Hammann, L Halby, ...
Nature Reviews Chemistry 5 (10), 726-749, 2021
7412021
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher
Nucleic acids research 39 (suppl_2), W362-W367, 2011
7222011
The evolution of genome mining in microbes–a review
N Ziemert, M Alanjary, T Weber
Natural product reports 33 (8), 988-1005, 2016
7172016
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
K Blin, S Shaw, HE Augustijn, ZL Reitz, F Biermann, M Alanjary, A Fetter, ...
Nucleic acids research 51 (W1), W46-W50, 2023
6532023
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ...
Nucleic acids research 48 (D1), D454-D458, 2020
6152020
Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)
C Rausch, T Weber, O Kohlbacher, W Wohlleben, DH Huson
Nucleic acids research 33 (18), 5799-5808, 2005
5162005
CRISPR-Cas9 based engineering of actinomycetal genomes
Y Tong, P Charusanti, L Zhang, T Weber, SY Lee
ACS synthetic biology 4 (9), 1020-1029, 2015
4692015
Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution
C Rausch, I Hoof, T Weber, W Wohlleben, DH Huson
BMC evolutionary biology 7, 1-15, 2007
4162007
Dissemination of antibiotic resistance genes from antibiotic producers to pathogens
X Jiang, MMH Ellabaan, P Charusanti, C Munck, K Blin, Y Tong, T Weber, ...
Nature communications 8 (1), 15784, 2017
3402017
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters
K Blin, MH Medema, R Kottmann, SY Lee, T Weber
Nucleic acids research, gkw960, 2016
2692016
Metabolic engineering of antibiotic factories: new tools for antibiotic production in actinomycetes
T Weber, P Charusanti, EM Musiol-Kroll, X Jiang, Y Tong, HU Kim, ...
Trends in biotechnology 33 (1), 15-26, 2015
2432015
The secondary metabolite bioinformatics portal: computational tools to facilitate synthetic biology of secondary metabolite production
T Weber, HU Kim
Synthetic and Systems Biotechnology 1 (2), 69-79, 2016
2322016
CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters
T Weber, C Rausch, P Lopez, I Hoof, V Gaykova, DH Huson, ...
Journal of biotechnology 140 (1-2), 13-17, 2009
2152009
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