| A white-box machine learning approach for revealing antibiotic mechanisms of action JH Yang, SN Wright, M Hamblin, D McCloskey, MA Alcantar, ... Cell 177 (6), 1649-1661. e9, 2019 | 260 | 2019 |
| A CRISPR-based assay for the detection of opportunistic infections post-transplantation and for the monitoring of transplant rejection MM Kaminski, MA Alcantar, IT Lape, R Greensmith, AC Huske, JA Valeri, ... Nature biomedical engineering 4 (6), 601-609, 2020 | 89 | 2020 |
| Sequence-to-function deep learning frameworks for engineered riboregulators JA Valeri, KM Collins, P Ramesh, MA Alcantar, BA Lepe, TK Lu, ... Nature communications 11 (1), 5058, 2020 | 82 | 2020 |
| An engineered live biotherapeutic for the prevention of antibiotic-induced dysbiosis A Cubillos-Ruiz, MA Alcantar, NM Donghia, P Cárdenas, J Avila-Pacheco, ... Nature biomedical engineering 6 (7), 910-921, 2022 | 45 | 2022 |
| Modulating the evolutionary trajectory of tolerance using antibiotics with different metabolic dependencies EJ Zheng, IW Andrews, AT Grote, AL Manson, MA Alcantar, AM Earl, ... Nature Communications 13 (1), 2525, 2022 | 26 | 2022 |
| Blood volume measurement using cardiovascular magnetic resonance and ferumoxytol: preclinical validation R Ramasawmy, T Rogers, MA Alcantar, DR McGuirt, JM Khan, P Kellman, ... Journal of Cardiovascular Magnetic Resonance 20 (1), 62, 2018 | 15 | 2018 |
| Network-level allosteric effects are elucidated by detailing how ligand-binding events modulate utilization of catalytic potentials JT Yurkovich, MA Alcantar, ZB Haiman, BO Palsson PLoS computational biology 14 (8), e1006356, 2018 | 3 | 2018 |
| A self‐propagating, barcoded transposon system for the dynamic rewiring of genomic networks MA English, MA Alcantar, JJ Collins Molecular Systems Biology 19 (6), e11398, 2023 | 1 | 2023 |
| Potentiators of antimicrobial and/or antiviral agents JH Yang, JJ Collins, MA Alcantar, R Bhattacharyya US Patent App. 17/608,919, 2022 | | 2022 |
| Catalytic potential and disturbance rejection of glycolytic kinases in the human red blood cell JT Yurkovich, MA Alcantar, ZB Haiman, BO Palsson bioRxiv, 227058, 2017 | | 2017 |
| Estimation of Circulating Blood Volume using Ferumoxytol R Ramasawmy, M Alcantar, JM Khan, AE Campbell-Washburn, ... Proc. Intl. Soc. Mag. Reson. Med 25, 2819, 2017 | | 2017 |
