Carl Troein

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Carsten PetersonProfessor, Computational Biology, Theoretical Physics, Lund UniversityVerified email at thep.lu.se
Andrew J. MillarUniversity of EdinburghVerified email at ed.ac.uk
Gerben van OoijenReader in Chronobiology, University of EdinburghVerified email at ed.ac.uk
Laura DixonUniversity of LeedsVerified email at leeds.ac.uk
Anders TunlidProfessor in Microbial Ecology, Lund UniversityVerified email at biol.lu.se
John O'NeillGroup Leader, Cell Biology Division, MRC Laboratory of Molecular Biology, Cambridge. UK.Verified email at mrc-lmb.cam.ac.uk
bouget Francois-YvesCNRSVerified email at obs-banyuls.fr
Johan Vallon-ChristerssonDivision of Oncology, Department of Clinical Sciences Lund, Lund University, SwedenVerified email at med.lu.se
Lao H SaalAssociate Professor, Lund UniversityVerified email at med.lu.se
Åke BorgDepartment of Oncology, Clinical Sciences, Lund University, SwedenVerified email at med.lu.se
mark smitsLectorer/researcher HAS University of Applied SciencesVerified email at has.nl
Michiel Op De BeeckLund UniversityVerified email at biol.lu.se
Ozgur AkmanAssociate Professor of Mathematics for Biology and MedicineVerified email at exeter.ac.uk
Herbert M SauroUniversity of WashingtonVerified email at u.washington.edu
James CW LockeGroup LeaderVerified email at slcu.cam.ac.uk
Matthew TurnerProfessor of Physics, Warwick UniversityVerified email at warwick.ac.uk
Tomas Martin-BertelsenStatens Serum Institut; Lund University; University of CopenhagenVerified email at ssi.dk
Syahril SiregarTechnological University DublinVerified email at tudublin.ie
Dag AhrenDr. Lund University and National Bioinformatics Infrastructure Sweden, Science for Life LaboratoryVerified email at biol.lu.se
Henrik JönssonProfessor, Sainsbury Laboratory, University of Cambridge, Professor, Lund UniversityVerified email at slcu.cam.ac.uk

Carl Troein

Computational Biology & Biological Physics, CEC, Lund University

Verified email at thep.lu.se - Homepage

Systems biology computational biology


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Random Boolean network models and the yeast transcriptional network S Kauffman, C Peterson, B Samuelsson, C Troein Proceedings of the National Academy of Sciences 100 (25), 14796-14799, 2003	690	2003
BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data LH Saal, C Troein, J Vallon-Christersson, S Gruvberger, A Borg, ... Genome Biol 3 (8), software0003.1–0003.6, 2002	550	2002
Circadian rhythms persist without transcription in a eukaryote JS O’Neill, G Van Ooijen, LE Dixon, C Troein, F Corellou, FY Bouget, ... Nature 469 (7331), 554-558, 2011	538	2011
Genetic networks with canalyzing Boolean rules are always stable S Kauffman, C Peterson, B Samuelsson, C Troein Proceedings of the National Academy of Sciences 101 (49), 17102-17107, 2004	397	2004
Transcriptional dynamics of the embryonic stem cell switch V Chickarmane, C Troein, UA Nuber, HM Sauro, C Peterson PLoS computational biology 2 (9), e123, 2006	310	2006
Superpolynomial growth in the number of attractors in Kauffman networks B Samuelsson, C Troein Physical Review Letters 90 (9), 98701, 2003	282	2003
Rethinking transcriptional activation in the Arabidopsis circadian clock K Fogelmark, C Troein PLOS Computational Biology 10 (7), e1003705, 2014	132	2014
Carbon availability triggers the decomposition of plant litter and assimilation of nitrogen by an ectomycorrhizal fungus F Rineau, F Shah, MM Smits, P Persson, T Johansson, R Carleer, ... The ISME journal 7 (10), 2010-2022, 2013	124	2013
Weather and seasons together demand complex biological clocks C Troein, JCW Locke, MS Turner, AJ Millar Current Biology 19 (22), 1961-1964, 2009	115	2009
The soil organic matter decomposition mechanisms in ectomycorrhizal fungi are tuned for liberating soil organic nitrogen C Nicolás, T Martin-Bertelsen, D Floudas, J Bentzer, M Smits, ... The ISME journal 13 (4), 977-988, 2019	110	2019
Enumerating designing sequences in the HP model A Irbäck, C Troein Journal of Biological Physics 28 (1), 1-15, 2002	96	2002
Proteasome function is required for biological timing throughout the twenty-four hour cycle G Van Ooijen, LE Dixon, C Troein, AJ Millar Current Biology 21 (10), 869-875, 2011	67	2011
Multiple light inputs to a simple clock circuit allow complex biological rhythms C Troein, F Corellou, LE Dixon, G van Ooijen, JS O’Neill, FY Bouget, ... The Plant Journal 66 (2), 375-385, 2011	67	2011
Fenton reaction facilitates organic nitrogen acquisition by an ectomycorrhizal fungus M Op De Beeck, C Troein, C Peterson, P Persson, A Tunlid New Phytologist 218 (1), 335-343, 2018	60	2018
Signal transduction pathway profiling of individual tumor samples T Breslin, M Krogh, C Peterson, C Troein BMC Bioinformatics 6 (1), 163, 2005	51	2005
Mutation-induced fold switching among lattice proteins C Holzgräfe, A Irbäck, C Troein Journal of Chemical Physics 135 (19), 195101, 2011	38	2011
On evaluating models in computational morphodynamics H Jönsson, J Gruel, P Krupinski, C Troein Current Opinion in Plant Biology 15 (1), 103-110, 2012	32	2012
Complementary approaches to understanding the plant circadian clock OE Akman, ML Guerriero, L Loewe, C Troein arXiv preprint arXiv:1002.4661, 2010	31	2010
Regulation of fungal decomposition at single-cell level M Op De Beeck, C Troein, S Siregar, L Gentile, G Abbondanza, ... The ISME Journal, 1-10, 2020	25	2020
Light and circadian regulation of clock components aids flexible responses to environmental signals LE Dixon, SK Hodge, G van Ooijen, C Troein, OE Akman, AJ Millar New Phytologist 203 (2), 568-577, 2014	24	2014

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