Shai S. Shen-Orr
Cited by
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Network motifs: simple building blocks of complex networks
R Milo, S Shen-Orr, S Itzkovitz, N Kashtan, D Chklovskii, U Alon
Science 298 (5594), 824-827, 2002
Network motifs in the transcriptional regulation network of Escherichia coli
SS Shen-Orr, R Milo, S Mangan, U Alon
Nature genetics 31 (1), 64-68, 2002
Superfamilies of evolved and designed networks
R Milo, S Itzkovitz, N Kashtan, R Levitt, S Shen-Orr, I Ayzenshtat, ...
Science 303 (5663), 1538-1542, 2004
A single-cell transcriptomic map of the human and mouse pancreas reveals inter-and intra-cell population structure
M Baron, A Veres, SL Wolock, AL Faust, R Gaujoux, A Vetere, JH Ryu, ...
Cell systems 3 (4), 346-360. e4, 2016
Variation in the human immune system is largely driven by non-heritable influences
P Brodin, V Jojic, T Gao, S Bhattacharya, CJL Angel, D Furman, ...
Cell 160 (1), 37-47, 2015
Glycolysis-mediated changes in acetyl-CoA and histone acetylation control the early differentiation of embryonic stem cells
A Moussaieff, M Rouleau, D Kitsberg, M Cohen, G Levy, D Barasch, ...
Cell metabolism 21 (3), 392-402, 2015
ImmPort, toward repurposing of open access immunological assay data for translational and clinical research
S Bhattacharya, P Dunn, CG Thomas, B Smith, H Schaefer, J Chen, Z Hu, ...
Scientific data 5 (1), 1-9, 2018
Cell type–specific gene expression differences in complex tissues
SS Shen-Orr, R Tibshirani, P Khatri, DL Bodian, F Staedtler, NM Perry, ...
Nature methods 7 (4), 287-289, 2010
Cytomegalovirus infection enhances the immune response to influenza
D Furman, V Jojic, S Sharma, SS Shen-Orr, CJ L. Angel, ...
Science translational medicine 7 (281), 281ra43-281ra43, 2015
A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring
A Alpert, Y Pickman, M Leipold, Y Rosenberg-Hasson, X Ji, R Gaujoux, ...
Nature medicine 25 (3), 487-495, 2019
Social network architecture of human immune cells unveiled by quantitative proteomics
JC Rieckmann, R Geiger, D Hornburg, T Wolf, K Kveler, D Jarrossay, ...
Nature immunology 18 (5), 583-593, 2017
UVB-induced tumor heterogeneity diminishes immune response in melanoma
Y Wolf, O Bartok, S Patkar, GB Eli, S Cohen, K Litchfield, R Levy, ...
Cell 179 (1), 219-235. e21, 2019
Systems analysis of immunity to influenza vaccination across multiple years and in diverse populations reveals shared molecular signatures
HI Nakaya, T Hagan, SS Duraisingham, EK Lee, M Kwissa, N Rouphael, ...
Immunity 43 (6), 1186-1198, 2015
Computational deconvolution: extracting cell type-specific information from heterogeneous samples
SS Shen-Orr, R Gaujoux
Current opinion in immunology 25 (5), 571-578, 2013
Ulcerative colitis mucosal transcriptomes reveal mitochondriopathy and personalized mechanisms underlying disease severity and treatment response
Y Haberman, R Karns, PJ Dexheimer, M Schirmer, J Somekh, I Jurickova, ...
Nature communications 10 (1), 38, 2019
GeneCards™ 2002: towards a complete, object-oriented, human gene compendium
M Safran, I Solomon, O Shmueli, M Lapidot, S Shen-Orr, A Adato, ...
Bioinformatics 18 (11), 1542-1543, 2002
An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging
N Sayed, Y Huang, K Nguyen, Z Krejciova-Rajaniemi, AP Grawe, T Gao, ...
Nature aging 1 (7), 598-615, 2021
Activation of the reward system boosts innate and adaptive immunity
TL Ben-Shaanan, H Azulay-Debby, T Dubovik, E Starosvetsky, B Korin, ...
Nature Medicine 22 (8), 940-944, 2016
Apoptosis and other immune biomarkers predict influenza vaccine responsiveness
D Furman, V Jojic, B Kidd, S Shen‐Orr, J Price, J Jarrell, T Tse, H Huang, ...
Molecular systems biology 9 (1), 659, 2013
Apoptosis and other immune biomarkers predict influenza vaccine responsiveness
D Furman, V Jojic, B Kidd, S Shen‐Orr, J Price, J Jarrell, T Tse, H Huang, ...
Molecular systems biology 9 (1), 659, 2013
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