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Tom van den Bergh
Tom van den Bergh
Bio-Prodict
Verified email at bio-prodict.nl
Title
Cited by
Cited by
Year
Bioinformatic analysis of a PLP-dependent enzyme superfamily suitable for biocatalytic applications
F Steffen-Munsberg, C Vickers, H Kohls, H Land, H Mallin, A Nobili, ...
Biotechnology advances 33 (5), 566-604, 2015
1952015
Drug design for ever, from hype to hope
G Seddon, V Lounnas, R McGuire, T van den Bergh, RP Bywater, ...
Journal of computer-aided molecular design 26 (1), 137-150, 2012
552012
Switch in cofactor specificity of a baeyer–villiger monooxygenase
A Beier, S Bordewick, M Genz, S Schmidt, T Van Den Bergh, C Peters, ...
ChemBioChem 17 (24), 2312-2315, 2016
462016
Engineering the Amine Transaminase from Vibrio fluvialis towards Branched‐Chain Substrates
M Genz, O Melse, S Schmidt, C Vickers, M Dörr, T Van Den Bergh, ...
ChemCatChem 8 (20), 3199-3202, 2016
452016
A structural classification of carbohydrate epimerases: from mechanistic insights to practical applications
S Van Overtveldt, T Verhaeghe, HJ Joosten, T van den Bergh, K Beerens, ...
Biotechnology Advances 33 (8), 1814-1828, 2015
392015
Alteration of the Donor/Acceptor Spectrum of the (S)-Amine Transaminase from Vibrio fluvialis
M Genz, C Vickers, T Van den Bergh, HJ Joosten, M Dörr, M Höhne, ...
International journal of molecular sciences 16 (11), 26953-26963, 2015
342015
Novel tools for extraction and validation of disease‐related mutations applied to fabry disease
R Kuipers, T van den Bergh, HJ Joosten, RH Lekanne dit Deprez, ...
Human mutation 31 (9), 1026-1032, 2010
302010
Simultaneous use of in silico design and a correlated mutation network as a tool to efficiently guide enzyme engineering
A Nobili, Y Tao, IV Pavlidis, T van den Bergh, HJ Joosten, T Tan, ...
ChemBioChem 16 (5), 805-810, 2015
262015
Enzyme discovery beyond homology: a unique hydroxynitrile lyase in the Bet v1 superfamily
E Lanfranchi, T Pavkov-Keller, EM Koehler, M Diepold, K Steiner, ...
Scientific reports 7 (1), 1-15, 2017
252017
Going to extremes–a metagenomic journey into the dark matter of life
A Aevarsson, AK Kaczorowska, BT Adalsteinsson, J Ahlqvist, ...
FEMS microbiology letters 368 (12), fnab067, 2021
142021
CorNet: Assigning function to networks of co-evolving residues by automated literature mining
T Van Den Bergh, G Tamo, A Nobili, Y Tao, T Tan, UT Bornscheuer, ...
PLoS One 12 (5), e0176427, 2017
112017
Mind the gap: preventing circularity in missense variant prediction
S Heijl, B Vroling, T van den Bergh, HJ Joosten
BioRxiv, 2020
42020
Bioinformatic analysis of fold-type III PLP-dependent enzymes discovers multimeric racemases
AM Knight, A Nobili, T van den Bergh, M Genz, HJ Joosten, D Albrecht, ...
Applied microbiology and biotechnology 101 (4), 1499-1507, 2017
42017
Towards a better understanding of proteins through protein-family data integration
T van den Bergh
PQDT-Global, 2022
2022
Erratum: Enzyme discovery beyond homology: a unique hydroxynitrile lyase in the Bet v1 superfamily
E Lanfranchi, T Pavkov-Keller, EM Koehler, M Diepold, K Steiner, ...
Scientific Reports 7 (1), 1-1, 2017
2017
Common pitfalls and novel opportunities for predicting variant pathogenicity
T van den Bergh, B Vroling, RKP Kuipers, HJ Joosten, G Vriend
protein-family data integration., 57, 2016
2016
Inherited arrhythmia syndromes, how to identify pathogenic mutations?
B Vroling, T van den Bergh, M Alders, S Heijl, M Tanck, RLD Deprez, ...
protein-family data integration., 95, 0
3DM Protein Engineering Super-Family systems applied to the P450 family
HJ Joosten, R Kuipers, T Van den Bergh, G Vriend, P Schaap
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