Yang Joon Kim
Yang Joon Kim
Chan Zuckerberg Biohub
Verified email at
Cited by
Cited by
Restoration of patterned vision with an engineered photoactivatable G protein-coupled receptor
MH Berry, A Holt, J Levitz, J Broichhagen, BM Gaub, M Visel, C Stanley, ...
Nature communications 8 (1), 1862, 2017
A sandbox for prediction and integration of DNA, RNA, and proteins in single cells
MD Luecken, DB Burkhardt, R Cannoodt, C Lance, A Agrawal, H Aliee, ...
Thirty-fifth Conference on Neural Information Processing Systems Datasets …, 2021
A matter of time: Using dynamics and theory to uncover mechanisms of transcriptional bursting
NC Lammers, YJ Kim, J Zhao, HG Garcia
Current opinion in cell biology 67, 147-157, 2020
Real-time single-cell characterization of the eukaryotic transcription cycle reveals correlations between RNA initiation, elongation, and cleavage
J Liu, D Hansen, E Eck, YJ Kim, M Turner, S Alamos, HG Garcia
PLoS computational Biology, 2021
Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing
J Liu, V Tran, VNP Vemuri, A Byrne, M Borja, YJ Kim, S Agarwal, R Wang, ...
Life Science Alliance 6 (1), 2023
Zebrahub–multimodal zebrafish developmental atlas reveals the state-transition dynamics of late-vertebrate pluripotent axial progenitors
M Lange, A Granados, S VijayKumar, J Bragantini, S Ancheta, ...
bioRxiv, 2023.03. 06.531398, 2023
Lighting up the central dogma for predictive developmental biology
HG Garcia, A Berrocal, YJ Kim, G Martini, J Zhao
Current topics in developmental biology 137, 1-35, 2020
Songpa-Kangdong Inflammatory Bowel Disease [SK-IBD] Study Group
SH Park, YJ Kim, KH Rhee, YH Kim, SN Hong, KH Kim, SI Seo, JM Cha, ...
Clinical characteristics and long-term prognosis of elderly-onset UC in a …, 2021
Predictive modeling reveals that higher-order cooperativity drives transcriptional repression in a synthetic developmental enhancer
YJ Kim, K Rhee, J Liu, S Jeammet, MA Turner, SJ Small, HG Garcia
Elife 11, e73395, 2022
CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data
CZI Single-Cell Biology, S Abdulla, B Aevermann, P Assis, S Badajoz, ...
bioRxiv, 2023.10. 30.563174, 2023
Single-cell and spatial multi-omics identify innate and stromal modules targeted by anti-integrin therapy in ulcerative colitis.
E Mennillo, YJ Kim, I Rusu, G Lee, LC Dorman, F Bernard-Vazquez, ...
BioRxiv, 2023
Optogenetic dissection of transcriptional repression in a multicellular organism
J Zhao, NC Lammers, S Alamos, YJ Kim, G Martini, HG Garcia
BioRxiv, 2022.11. 20.517211, 2022
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis
E Mennillo, YJ Kim, G Lee, I Rusu, RK Patel, LC Dorman, E Flynn, S Li, ...
Nature Communications 15 (1), 1493, 2024
Tutorial: guidelines for manual cell type annotation of single-cell multi-omics datasets using interactive software
YJ Kim, A Tarashansky, K Liang, M Urisko, L Dorman, M Borja, N Neff, ...
bioRxiv, 2023.07. 11.548639, 2023
Single-nucleus RNA sequencing provides insights into the GL261-GSC syngeneic mouse model of glioblastoma
L Garcia-Vicente, M Borja, V Tran, A Alvarez-Vazquez, ...
bioRxiv, 2023.10. 26.564166, 2023
The system can't perform the operation now. Try again later.
Articles 1–15