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Till Rudack
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Molecular dynamics simulations of large macromolecular complexes
JR Perilla, BC Goh, CK Cassidy, B Liu, RC Bernardi, T Rudack, H Yu, ...
Current opinion in structural biology 31, 64-74, 2015
4432015
In situ structure of neuronal C9orf72 poly-GA aggregates reveals proteasome recruitment
Q Guo, C Lehmer, A Martínez-Sánchez, T Rudack, F Beck, H Hartmann, ...
Cell 172 (4), 696-705. e12, 2018
3782018
Structure of the human 26S proteasome at a resolution of 3.9 Å
A Schweitzer, A Aufderheide, T Rudack, F Beck, G Pfeifer, JM Plitzko, ...
Proceedings of the National Academy of Sciences 113 (28), 7816-7821, 2016
2202016
QwikMD—integrative molecular dynamics toolkit for novices and experts
JV Ribeiro, RC Bernardi, T Rudack, JE Stone, JC Phillips, PL Freddolino, ...
Scientific reports 6 (1), 1-14, 2016
1922016
NAMD goes quantum: an integrative suite for hybrid simulations
MCR Melo, RC Bernardi, T Rudack, M Scheurer, C Riplinger, JC Phillips, ...
Nature methods 15 (5), 351-354, 2018
1872018
Structural insights into the functional cycle of the ATPase module of the 26S proteasome
M Wehmer, T Rudack, F Beck, A Aufderheide, G Pfeifer, J Plitzko, ...
Proceedings of the National Academy of Sciences 114 (6), 1305-1310, 2017
1662017
N-Ras forms dimers at POPC membranes
J Güldenhaupt, T Rudack, P Bachler, D Mann, G Triola, H Waldmann, ...
Biophysical journal 103 (7), 1585-1593, 2012
1592012
Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating
MR Eisele, RG Reed, T Rudack, A Schweitzer, F Beck, I Nagy, G Pfeifer, ...
Cell reports 24 (5), 1301-1315. e5, 2018
1192018
Structural insights into photosystem II assembly
J Zabret, S Bohn, SK Schuller, O Arnolds, M Möller, J Meier-Credo, ...
Nature plants 7 (4), 524-538, 2021
1132021
Insights into the assembly and activation of the microtubule nucleator γ-TuRC
P Liu, E Zupa, A Neuner, A Böhler, J Loerke, D Flemming, T Ruppert, ...
Nature 578 (7795), 467-471, 2020
1032020
Ras and GTPase-activating protein (GAP) drive GTP into a precatalytic state as revealed by combining FTIR and biomolecular simulations
T Rudack, F Xia, J Schlitter, C Kötting, K Gerwert
Proceedings of the National Academy of Sciences 109 (38), 15295-15300, 2012
932012
PyContact: Rapid, customizable, and visual analysis of noncovalent interactions in MD simulations
M Scheurer, P Rodenkirch, M Siggel, RC Bernardi, K Schulten, ...
Biophysical journal 114 (3), 577-583, 2018
902018
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
TK Gupta, S Klumpe, K Gries, S Heinz, W Wietrzynski, N Ohnishi, ...
Cell 184 (14), 2021
872021
Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity
TK Gupta, S Klumpe, K Gries, S Heinz, W Wietrzynski, N Ohnishi, ...
bioRxiv, 2020
872020
Computational methodologies for real-space structural refinement of large macromolecular complexes
BC Goh, JA Hadden, RC Bernardi, A Singharoy, R McGreevy, T Rudack, ...
Annual review of biophysics 45, 253-278, 2016
822016
Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle
P Majumder, T Rudack, F Beck, R Danev, G Pfeifer, I Nagy, W Baumeister
Proceedings of the National Academy of Sciences 116 (2), 534-539, 2019
672019
The role of magnesium for geometry and charge in GTP hydrolysis, revealed by quantum mechanics/molecular mechanics simulations
T Rudack, F Xia, J Schlitter, C Kötting, K Gerwert
Biophysical journal 103 (2), 293-302, 2012
672012
GTP hydrolysis without an active site base: A unifying mechanism for ras and related GTPases
AR Calixto, C Moreira, A Pabis, C Kötting, K Gerwert, T Rudack, ...
Journal of the American Chemical Society 141 (27), 10684-10701, 2019
542019
Detailed Structure of the H2PO4––Guanosine Diphosphate Intermediate in Ras-GAP Decoded from FTIR Experiments by Biomolecular Simulations
F Xia, T Rudack, Q Cui, C Kötting, K Gerwert
Journal of the American Chemical Society 134 (49), 20041-20044, 2012
352012
Lamprey Parapinopsin (“UVLamP”): a bistable UV‐sensitive optogenetic switch for ultrafast control of GPCR pathways
D Eickelbeck, T Rudack, SA Tennigkeit, T Surdin, R Karapinar, ...
ChemBioChem 21 (5), 612, 2020
292020
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