Rosemary Braun
Rosemary Braun
Associate Professor - Molecular Biosciences, Applied Math, & Physics - Northwestern University
Verified email at - Homepage
Cited by
Cited by
Scalable molecular dynamics with NAMD
JC Phillips, R Braun, W Wang, J Gumbart, E Tajkhorshid, E Villa, C Chipot, ...
Journal of computational chemistry 26 (16), 1781-1802, 2005
MicroRNA expression in squamous cell carcinoma and adenocarcinoma of the esophagus: associations with survival
EA Mathé, GH Nguyen, ED Bowman, Y Zhao, A Budhu, AJ Schetter, ...
Clinical cancer research 15 (19), 6192-6200, 2009
Imaging the migration pathways for O2, CO, NO, and Xe inside myoglobin
J Cohen, A Arkhipov, R Braun, K Schulten
Biophysical journal 91 (5), 1844-1857, 2006
Acoustic enhancement of sleep slow oscillations and concomitant memory improvement in older adults
NA Papalambros, G Santostasi, RG Malkani, R Braun, S Weintraub, ...
Frontiers in human neuroscience 11, 109, 2017
Genetically engineered gold-binding polypeptides: structure prediction and molecular dynamics
R Braun, M Sarikaya, K Schulten
Journal of Biomaterials Science, Polymer Edition 13 (7), 747-757, 2002
Reconstructing potentials of mean force through time series analysis of steered molecular dynamics simulations
JR Gullingsrud, R Braun, K Schulten
Journal of Computational Physics 151 (1), 190-211, 1999
Universal method for robust detection of circadian state from gene expression
R Braun, WL Kath, M Iwanaszko, E Kula-Eversole, SM Abbott, KJ Reid, ...
Proceedings of the National Academy of Sciences 115 (39), E9247-E9256, 2018
NAD+ controls circadian reprogramming through PER2 nuclear translocation to counter aging
DC Levine, H Hong, BJ Weidemann, KM Ramsey, AH Affinati, ...
Molecular cell 78 (5), 835-849. e7, 2020
Molecular dynamics simulations of micelle formation around dimeric glycophorin A transmembrane helices
R Braun, DM Engelman, K Schulten
Biophysical journal 87 (2), 754-763, 2004
Pathways of distinction analysis: a new technique for multi–SNP analysis of GWAS data
R Braun, K Buetow
PLoS genetics 7 (6), e1002101, 2011
Taj khorshid E, Villa E, Chipot C, Skeel RD, Kale L, Schulten K. 2005. Scalable molecular dynamics with NAMD
JC Phillips, R Braun, W Wang, J Gumbart
J Comp Chem 26, 1781-1802, 0
Needles in the haystack: identifying individuals present in pooled genomic data
R Braun, W Rowe, C Schaefer, J Zhang, K Buetow
PLoS genetics 5 (10), e1000668, 2009
Strengthening sleep–autonomic interaction via acoustic enhancement of slow oscillations
D Grimaldi, NA Papalambros, KJ Reid, SM Abbott, RG Malkani, M Gendy, ...
Sleep 42 (5), zsz036, 2019
Discovery analysis of TCGA data reveals association between germline genotype and survival in ovarian cancer patients
R Braun, R Finney, C Yan, QR Chen, Y Hu, M Edmonson, D Meerzaman, ...
PloS one 8 (3), e55037, 2013
Autonomic dysregulation and sleep homeostasis in insomnia
D Grimaldi, KJ Reid, NA Papalambros, RI Braun, RG Malkani, SM Abbott, ...
Sleep 44 (6), zsaa274, 2021
regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors
G Wilk, R Braun
PLoS genetics 14 (12), e1007837, 2018
Identifying differential correlation in gene/pathway combinations
R Braun, L Cope, G Parmigiani
BMC bioinformatics 9 (1), 1-17, 2008
Systems analysis of high-throughput data
R Braun
A Systems Biology Approach to Blood, 153-187, 2014
Integrative analysis reveals disrupted pathways regulated by microRNAs in cancer
G Wilk, R Braun
Nucleic Acids Research 46 (3), 1089-1101, 2018
Light at night in older age is associated with obesity, diabetes, and hypertension
M Kim, TH Vu, MB Maas, RI Braun, MS Wolf, T Roenneberg, ML Daviglus, ...
Sleep 46 (3), zsac130, 2023
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