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James McCarty
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Amyloid oligomers: A joint experimental/computational perspective on Alzheimer’s disease, Parkinson’s disease, type II diabetes, and amyotrophic lateral sclerosis
PH Nguyen, A Ramamoorthy, BR Sahoo, J Zheng, P Faller, JE Straub, ...
Chemical reviews 121 (4), 2545-2647, 2021
4792021
Complete phase diagram for liquid–liquid phase separation of intrinsically disordered proteins
J McCarty, KT Delaney, SPO Danielsen, GH Fredrickson, JE Shea
The journal of physical chemistry letters 10 (8), 1644-1652, 2019
2312019
Narrow equilibrium window for complex coacervation of tau and RNA under cellular conditions
Y Lin, J McCarty, JN Rauch, KT Delaney, KS Kosik, GH Fredrickson, ...
Elife 8, e42571, 2019
1402019
A variational conformational dynamics approach to the selection of collective variables in metadynamics
J McCarty, M Parrinello
The Journal of chemical physics 147 (20), 2017
1182017
Molecular design of self-coacervation phenomena in block polyampholytes
SPO Danielsen, J McCarty, JE Shea, KT Delaney, GH Fredrickson
Proceedings of the National Academy of Sciences 116 (17), 8224-8232, 2019
1062019
An analytical coarse-graining method which preserves the free energy, structural correlations, and thermodynamic state of polymer melts from the atomistic to the mesoscale
J McCarty, AJ Clark, J Copperman, MG Guenza
The Journal of chemical physics 140 (20), 2014
802014
The proline-rich domain promotes Tau liquid–liquid phase separation in cells
X Zhang, M Vigers, J McCarty, JN Rauch, GH Fredrickson, MZ Wilson, ...
Journal of Cell Biology 219 (11), e202006054, 2020
762020
Heightened cold-denaturation of proteins at the ice–water interface
A Arsiccio, J McCarty, R Pisano, JE Shea
Journal of the American Chemical Society 142 (12), 5722-5730, 2020
752020
Thermodynamic consistency in variable-level coarse graining of polymeric liquids
AJ Clark, J McCarty, IY Lyubimov, MG Guenza
Physical Review Letters 109 (16), 168301, 2012
702012
Small ion effects on self-coacervation phenomena in block polyampholytes
SPO Danielsen, J McCarty, JE Shea, KT Delaney, GH Fredrickson
The Journal of chemical physics 151 (3), 2019
582019
Analytical rescaling of polymer dynamics from mesoscale simulations
IY Lyubimov, J McCarty, A Clark, MG Guenza
The Journal of chemical physics 132 (22), 2010
582010
Effective potentials for representing polymers in melts as chains of interacting soft particles
AJ Clark, J McCarty, MG Guenza
The Journal of Chemical Physics 139 (12), 2013
532013
Variationally optimized free-energy flooding for rate calculation
J McCarty, O Valsson, P Tiwary, M Parrinello
Physical review letters 115 (7), 070601, 2015
462015
Thermodynamic consistency between analytic integral equation theory and coarse-grained molecular dynamics simulations of homopolymer melts
J McCarty, AJ Clark, IY Lyubimov, MG Guenza
Macromolecules 45 (20), 8482-8493, 2012
462012
Multiscale modeling of coarse-grained macromolecular liquids
J McCarty, IY Lyubimov, MG Guenza
The Journal of Physical Chemistry B 113 (35), 11876-11886, 2009
452009
Effect of surfactants on surface-induced denaturation of proteins: evidence of an orientation-dependent mechanism
A Arsiccio, J McCarty, R Pisano, JE Shea
The Journal of Physical Chemistry B 122 (49), 11390-11399, 2018
432018
Accuracy, transferability, and efficiency of coarse-grained models of molecular liquids
MG Guenza, M Dinpajooh, J McCarty, IY Lyubimov
The Journal of Physical Chemistry B 122 (45), 10257-10278, 2018
382018
Effective soft-core potentials and mesoscopic simulations of binary polymer mixtures
J McCarty, IY Lyubimov, MG Guenza
Macromolecules 43 (8), 3964-3979, 2010
362010
Variational Flooding Study of a SN2 Reaction
GM Piccini, JJ McCarty, O Valsson, M Parrinello
The journal of physical chemistry letters 8 (3), 580-583, 2017
332017
Multiscale modeling of binary polymer mixtures: Scale bridging in the athermal and thermal regime
J McCarty, MG Guenza
The Journal of Chemical Physics 133 (9), 2010
212010
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Articles 1–20