Giulia Guidi
Giulia Guidi
Lawrence Berkeley National Laboratory and Cornell University
Verified email at - Homepage
Cited by
Cited by
On how to improve fpga-based systems design productivity via sdaccel
G Guidi, E Reggiani, L Di Tucci, G Durelli, M Blott, MD Santambrogio
2016 IEEE international parallel and distributed processing symposium …, 2016
Logan: High-performance gpu-based x-drop long-read alignment
A Zeni, G Guidi, M Ellis, N Ding, MD Santambrogio, S Hofmeyr, A Buluç, ...
2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020
diBELLA: Distributed long read to long read alignment
M Ellis, G Guidi, A Buluç, L Oliker, K Yelick
Proceedings of the 48th International Conference on Parallel Processing, 1-11, 2019
Distributed many-to-many protein sequence alignment using sparse matrices
O Selvitopi, S Ekanayake, G Guidi, GA Pavlopoulos, A Azad, A Buluç
SC20: International Conference for High Performance Computing, Networking …, 2020
The parallelism motifs of genomic data analysis
K Yelick, A Buluç, M Awan, A Azad, B Brock, R Egan, S Ekanayake, ...
Philosophical Transactions of the Royal Society A 378 (2166), 20190394, 2020
BELLA: Berkeley efficient long-read to long-read aligner and overlapper
G Guidi, M Ellis, D Rokhsar, K Yelick, A Buluç
SIAM Conference on Applied and Computational Discrete Algorithms (ACDA21 …, 2021
10 years later: Cloud computing is closing the performance gap
G Guidi, M Ellis, A Buluç, K Yelick, D Culler
Companion of the ACM/SPEC International Conference on Performance …, 2021
Parallel string graph construction and transitive reduction for de novo genome assembly
G Guidi, O Selvitopi, M Ellis, L Oliker, K Yelick, A Buluç
2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2021
Profax: A hardware acceleration of a protein folding algorithm
G Guidi, L Di Tucci, MD Santambrogio
2016 IEEE 2nd International Forum on Research and Technologies for Society …, 2016
Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly
G Guidi, G Raulet, D Rokhsar, L Oliker, K Yelick, A Buluc
Proceedings of the 51st International Conference on Parallel Processing, 1-11, 2022
HUGenomics: A support to personalized medicine research
L Di Tucci, G Guidi, S Notargiacomo, L Cerina, A Scolari, ...
2017 IEEE 3rd International Forum on Research and Technologies for Society …, 2017
Parallel Algorithms for De Novo Long Read Genome Assembly via Sparse Linear Algebra
G Guidi
UC Berkeley, 2022
BuDDI: A Declarative Bloom Language for CALM Programming
R Garcia, G Guidi
arXiv preprint arXiv:2109.08192, 2021
Efficient long-read overlap detection and alignment for De Novo genome assembly
Italy, 2018
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Articles 1–14