| Logan: High-performance gpu-based x-drop long-read alignment A Zeni, G Guidi, M Ellis, N Ding, MD Santambrogio, S Hofmeyr, A Buluç, ... 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020 | 42 | 2020 |
| On how to improve fpga-based systems design productivity via sdaccel G Guidi, E Reggiani, L Di Tucci, G Durelli, M Blott, MD Santambrogio 2016 IEEE international parallel and distributed processing symposium …, 2016 | 39 | 2016 |
| Distributed many-to-many protein sequence alignment using sparse matrices O Selvitopi, S Ekanayake, G Guidi, GA Pavlopoulos, A Azad, A Buluç SC20: International Conference for High Performance Computing, Networking …, 2020 | 22 | 2020 |
| diBELLA: Distributed long read to long read alignment M Ellis, G Guidi, A Buluç, L Oliker, K Yelick Proceedings of the 48th International Conference on Parallel Processing, 1-11, 2019 | 21 | 2019 |
| The parallelism motifs of genomic data analysis K Yelick, A Buluç, M Awan, A Azad, B Brock, R Egan, S Ekanayake, ... Philosophical Transactions of the Royal Society A 378 (2166), 20190394, 2020 | 18 | 2020 |
| BELLA: Berkeley efficient long-read to long-read aligner and overlapper G Guidi, M Ellis, D Rokhsar, K Yelick, A Buluç SIAM Conference on Applied and Computational Discrete Algorithms (ACDA21 …, 2021 | 17 | 2021 |
| 10 years later: Cloud computing is closing the performance gap G Guidi, M Ellis, A Buluç, K Yelick, D Culler Companion of the ACM/SPEC International Conference on Performance …, 2021 | 13 | 2021 |
| Parallel string graph construction and transitive reduction for de novo genome assembly G Guidi, O Selvitopi, M Ellis, L Oliker, K Yelick, A Buluç 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2021 | 11 | 2021 |
| Profax: A hardware acceleration of a protein folding algorithm G Guidi, L Di Tucci, MD Santambrogio 2016 IEEE 2nd International Forum on Research and Technologies for Society …, 2016 | 3 | 2016 |
| Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU L Burchard, MX Zhao, J Langguth, A Buluç, G Guidi arXiv preprint arXiv:2304.08662, 2023 | 2 | 2023 |
| Extreme-scale many-against-many protein similarity search O Selvitopi, S Ekanayake, G Guidi, MG Awan, GA Pavlopoulos, A Azad, ... SC22: International Conference for High Performance Computing, Networking …, 2022 | 2 | 2022 |
| Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly G Guidi, G Raulet, D Rokhsar, L Oliker, K Yelick, A Buluç Proceedings of the 51st International Conference on Parallel Processing, 1-11, 2022 | 2 | 2022 |
| HUGenomics: A support to personalized medicine research L Di Tucci, G Guidi, S Notargiacomo, L Cerina, A Scolari, ... 2017 IEEE 3rd International Forum on Research and Technologies for Society …, 2017 | 1 | 2017 |
| Parallel Algorithms for De Novo Long Read Genome Assembly via Sparse Linear Algebra G Guidi University of California, Berkeley, 2022 | | 2022 |
| BuDDI: A Declarative Bloom Language for CALM Programming R Garcia, G Guidi arXiv preprint arXiv:2109.08192, 2021 | | 2021 |
| Efficient long-read overlap detection and alignment for De Novo genome assembly G GUIDI Italy, 2018 | | 2018 |
Aydın BuluçLawrence Berkeley National Laboratory and UC BerkeleyVerified email at lbl.gov
