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Katja Baerenfaller
Katja Baerenfaller
Group lead Molecular Allergology
Verified email at siaf.uzh.ch
Title
Cited by
Cited by
Year
Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics
K Baerenfaller, J Grossmann, MA Grobei, R Hull, M Hirsch-Hoffmann, ...
Science 320 (5878), 938-941, 2008
5662008
Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks
S Reiland, G Messerli, K Baerenfaller, B Gerrits, A Endler, J Grossmann, ...
Plant physiology 150 (2), 889-903, 2009
5362009
Systems‐based analysis of Arabidopsis leaf growth reveals adaptation to water deficit
K Baerenfaller, C Massonnet, S Walsh, S Baginsky, P Bühlmann, ...
Molecular systems biology 8 (1), 606, 2012
2322012
Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation
J Bazin, K Baerenfaller, SJ Gosai, BD Gregory, M Crespi, J Bailey-Serres
Proceedings of the National Academy of Sciences 114 (46), E10018-E10027, 2017
1812017
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)
S Reiland, G Finazzi, A Endler, A Willig, K Baerenfaller, J Grossmann, ...
Proceedings of the National Academy of Sciences 108 (31), 12955-12960, 2011
1712011
Global COVID-19 lockdown highlights humans as both threats and custodians of the environment
AE Bates, RB Primack, BS Biggar, TJ Bird, ME Clinton, RJ Command, ...
Biological conservation 263, 109175, 2021
1472021
Advances and recent developments in asthma in 2020
L Cevhertas, I Ogulur, DJ Maurer, D Burla, M Ding, K Jansen, J Koch, ...
Allergy 75 (12), 3124-3146, 2020
1372020
5-Fluorouracil is efficiently removed from DNA by the base excision and mismatch repair systems
F Fischer, K Baerenfaller, J Jiricny
Gastroenterology 133 (6), 1858-1868, 2007
1292007
Advances and highlights in biomarkers of allergic diseases
I Ogulur, Y Pat, O Ardicli, E Barletta, L Cevhertas, ...
Allergy 76 (12), 3659-3686, 2021
1282021
Traditional and digital biomarkers: two worlds apart?
LM Babrak, J Menetski, M Rebhan, G Nisato, M Zinggeler, N Brasier, ...
Digital biomarkers 3 (2), 92-102, 2019
1282019
Large-scale proteomics of the cassava storage root and identification of a target gene to reduce postharvest deterioration
H Vanderschuren, E Nyaboga, JS Poon, K Baerenfaller, J Grossmann, ...
The Plant Cell 26 (5), 1913-1924, 2014
1102014
MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data
HJ Joshi, M Hirsch-Hoffmann, K Baerenfaller, W Gruissem, S Baginsky, ...
Plant physiology 155 (1), 259-270, 2011
1022011
Plastid Proteome Assembly without Toc159: Photosynthetic Protein Import and Accumulation of N-Acetylated Plastid Precursor Proteins
S Bischof, K Baerenfaller, T Wildhaber, R Troesch, PA Vidi, B Roschitzki, ...
The Plant Cell 23 (11), 3911-3928, 2011
952011
Jasmonate controls polypeptide patterning in undamaged tissue in wounded Arabidopsis leaves
A Gfeller, K Baerenfaller, J Loscos, A Chételat, S Baginsky, EE Farmer
Plant Physiology 156 (4), 1797-1807, 2011
862011
pep2pro: a new tool for comprehensive proteome data analysis to reveal information about organ-specific proteomes in Arabidopsis thaliana
K Baerenfaller, M Hirsch-Hoffmann, J Svozil, R Hull, D Russenberger, ...
Integrative Biology 3 (3), 225-237, 2011
822011
Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism
DD Seaton, A Graf, K Baerenfaller, M Stitt, AJ Millar, W Gruissem
Molecular systems biology 14 (3), e7962, 2018
722018
A workflow to increase the detection rate of proteins from unsequenced organisms in high‐throughput proteomics experiments
J Grossmann, B Fischer, K Baerenfaller, J Owiti, JM Buhmann, ...
Proteomics 7 (23), 4245-4254, 2007
562007
Benchmarking of analysis strategies for data-independent acquisition proteomics using a large-scale dataset comprising inter-patient heterogeneity
K Fröhlich, E Brombacher, M Fahrner, D Vogele, L Kook, N Pinter, ...
Nature communications 13 (1), 2622, 2022
462022
Taking the next step: building an Arabidopsis information portal
International Arabidopsis Informatics Consortium
The Plant Cell 24 (6), 2248-2256, 2012
382012
Diurnal changes in the histone H3 signature H3K9ac|H3K27ac|H3S28p are associated with diurnal gene expression in Arabidopsis
K Baerenfaller, H Shu, M Hirsch‐Hoffmann, J Fütterer, L Opitz, ...
Plant, cell & environment 39 (11), 2557-2569, 2016
372016
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Articles 1–20