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Ondrej Gutten
Ondrej Gutten
Institute of Organic Chemistry and Biochemistry
Verified email at uochb.cas.cz
Title
Cited by
Cited by
Year
Toward accurate conformational energies of smaller peptides and medium-sized macrocycles: MPCONF196 benchmark energy data set
J Rezac, D Bím, O Gutten, L Rulisek
Journal of chemical theory and computation 14 (3), 1254-1266, 2018
922018
Predicting the stability constants of metal-ion complexes from first principles
O Gutten, L Rulisek
Inorganic Chemistry 52 (18), 10347-10355, 2013
722013
Enzymatic preparation of 2′–5′, 3′–5′-cyclic dinucleotides, their binding properties to stimulator of interferon genes adaptor protein, and structure/activity correlations
B Novotná, L Vaneková, M Zavrel, M Budesinsky, M Dejmek, M Smola, ...
Journal of medicinal chemistry 62 (23), 10676-10690, 2019
522019
Interaction of metal ions with biomolecular ligands: how accurate are calculated free energies associated with metal ion complexation?
O Gutten, I Besseova, L Rulisek
The Journal of Physical Chemistry A 115 (41), 11394-11402, 2011
492011
Cyclam Derivatives with a Bis (phosphinate) or a Phosphinato–Phosphonate Pendant Arm: Ligands for Fast and Efficient Copper (II) Complexation for Nuclear Medical Applications
T David, V Kubicek, O Gutten, P Lubal, J Kotek, HJ Pietzsch, L Rulisek, ...
Inorganic Chemistry 54 (24), 11751-11766, 2015
422015
Synthesis and biological evaluation of phosphoester and phosphorothioate prodrugs of STING agonist 3′, 3′-c-Di (2′ F, 2′ dAMP)
M Pimková Polidarová, P Brehova, MM Kaiser, M Smola, M Dracinsky, ...
Journal of Medicinal Chemistry 64 (11), 7596-7616, 2021
322021
Ligand strain and its conformational complexity is a major factor in the binding of cyclic dinucleotides to STING protein
M Smola, O Gutten, M Dejmek, M Kožíšek, T Evangelidis, ZA Tehrani, ...
Angewandte Chemie International Edition 60 (18), 10172-10178, 2021
252021
Macrocycle conformational sampling by DFT-D3/COSMO-RS methodology
O Gutten, D Bim, J Rezac, L Rulisek
Journal of Chemical Information and Modeling 58 (1), 48-60, 2018
212018
Protein–Ligand Interactions in the STING Binding Site Probed by Rationally Designed Single-Point Mutations: Experiment and Theory
Z Vavřina, O Gutten, M Smola, M Zavřel, Z Aliakbar Tehrani, V Charvat, ...
Biochemistry 60 (8), 607-620, 2021
172021
Predicting effects of site-directed mutagenesis on enzyme kinetics by QM/MM and QM calculations: a case of glutamate carboxypeptidase II
D Bím, M Navrátil, O Gutten, J Konvalinka, Z Kutil, M Culka, V Navrátil, ...
The Journal of Physical Chemistry B 126 (1), 132-143, 2022
132022
Enzymatic synthesis of 3′–5′, 3′–5′ cyclic dinucleotides, their binding properties to the stimulator of interferon genes adaptor protein, and structure/activity correlations
B Novotna, L Holá, M Stas, O Gutten, M Smola, M Zavrel, Z Vavrina, ...
Biochemistry 60 (48), 3714-3727, 2021
102021
How simple is too simple? Computational perspective on importance of second-shell environment for metal-ion selectivity
O Gutten, L Rulíšek
Physical Chemistry Chemical Physics 17 (22), 14393-14404, 2015
92015
Mapping conformational space of all 8000 tripeptides by quantum chemical methods: what strain is affordable within folded protein chains?
M Culka, T Kalvoda, O Gutten, L Rulisek
The Journal of Physical Chemistry B 125 (1), 58-69, 2021
72021
Conformational energies and equilibria of cyclic dinucleotides in vacuo and in solution: computational chemistry vs. NMR experiments
O Gutten, P Jurečka, ZA Tehrani, M Buděšínský, J Řezáč, L Rulíšek
Physical Chemistry Chemical Physics 23 (12), 7280-7294, 2021
62021
Teoretická bioanorganická chemie a spektroskopie
D Bím, O Gutten, J Chalupský, M Srnec, L Rulíšek
Chemické listy 110 (5), 354-364, 2016
12016
Correction to “Interaction of Metal Ions with Biomolecular Ligands: How Accurate Are Calculated Free Energies Associated with Metal Ion Complexation?”
O Gutten, I Beššeová, L Rulíšek
The Journal of Physical Chemistry A 116 (32), 8407-8407, 2012
12012
Acidity constants and protonation sites of cyclic dinucleotides determined by capillary electrophoresis, quantum chemical calculations, and NMR spectroscopy
S Štěpánová, E Andris, O Gutten, M Buděšínský, M Dejmek, P Břehová, ...
Electrophoresis, 2023
2023
Metal-Ion Selectivity from Quantum-Chemical Perspective
O Gutten
Univerzita Karlova, Přírodovědecká fakulta, 2018
2018
Theoretical Bioinorganic Chemistry and Spectroscopy
D Bim, O Gutten, J Chalupsky, M Srnec, L Rulisek
CHEMICKE LISTY 110 (5), 354-364, 2016
2016
Modelling of the interaction of proteins and peptides with metal ions
O Gutten
Univerzita Karlova, Přírodovědecká fakulta, 2010
2010
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