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Alexander Balaeff
Alexander Balaeff
Launchpad Therapeutics
Verified email at bdtx.com
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Cited by
Cited by
Year
Steering electrons on moving pathways
DN Beratan, SS Skourtis, IA Balabin, A Balaeff, S Keinan, R Venkatramani, ...
Accounts of chemical research 42 (10), 1669-1678, 2009
1902009
Structural dynamics of the lac repressor–DNA complex revealed by a multiscale simulation
E Villa, A Balaeff, K Schulten
Proceedings of the National Academy of Sciences 102 (19), 6783-6788, 2005
1852005
Biological charge transfer via flickering resonance
Y Zhang, C Liu, A Balaeff, SS Skourtis, DN Beratan
Proceedings of the National Academy of Sciences 111 (28), 10049-10054, 2014
1762014
PNA versus DNA: effects of structural fluctuations on electronic structure and hole-transport mechanisms
E Hatcher, A Balaeff, S Keinan, R Venkatramani, DN Beratan
Journal of the American Chemical Society 130 (35), 11752-11761, 2008
1382008
Modeling DNA loops using the theory of elasticity
A Balaeff, L Mahadevan, K Schulten
Physical Review E 73 (3), 031919, 2006
1362006
Modeling DNA loops using the theory of elasticity
A Balaeff, L Mahadevan, K Schulten
Physical Review E 73 (3), 031919, 2006
1362006
Nucleic acid charge transfer: Black, white and gray
R Venkatramani, S Keinan, A Balaeff, DN Beratan
Coordination chemistry reviews 255 (7-8), 635-648, 2011
1322011
Elastic rod model of a DNA loop in the lac operon
A Balaeff, L Mahadevan, K Schulten
Physical Review Letters 83 (23), 4900, 1999
1051999
Multiscale method for simulating protein-DNA complexes
E Villa, A Balaeff, L Mahadevan, K Schulten
Multiscale Modeling & Simulation 2 (4), 527-553, 2004
1022004
Role of nucleobase energetics and nucleobase interactions in single-stranded peptide nucleic acid charge transfer
A Paul, S Bezer, R Venkatramani, L Kocsis, E Wierzbinski, A Balaeff, ...
Journal of the American Chemical Society 131 (18), 6498-6507, 2009
702009
Modelling DNA loops using continuum and statistical mechanics One contribution of 16 to a Theme ‘The mechanics of DNA’
A Balaeff, CR Koudella, L Mahadevan, K Schulten
Philosophical Transactions of the Royal Society of London. Series A …, 2004
652004
Structural basis for cooperative DNA binding by CAP and lac repressor
A Balaeff, L Mahadevan, K Schulten
Structure 12 (1), 123-132, 2004
652004
Evidence for a near-resonant charge transfer mechanism for double-stranded peptide nucleic acid
R Venkatramani, KL Davis, E Wierzbinski, S Bezer, A Balaeff, S Keinan, ...
Journal of the American Chemical Society 133 (1), 62-72, 2011
642011
Solution structure of a peptide nucleic acid duplex from NMR data: features and limitations
W He, E Hatcher, A Balaeff, DN Beratan, RR Gil, M Madrid, C Achim
Journal of the American Chemical Society 130 (40), 13264-13273, 2008
592008
Effect of backbone flexibility on charge transfer rates in peptide nucleic acid duplexes
E Wierzbinski, A de Leon, X Yin, A Balaeff, KL Davis, S Reppireddy, ...
Journal of the American Chemical Society 134 (22), 9335-9342, 2012
502012
Structure prediction of a complex between the chromosomal protein HMG‐D and DNA
A Balaeff, MEA Churchill, K Schulten
Proteins: Structure, Function, and Bioinformatics 30 (2), 113-135, 1998
481998
Charge splitters and charge transport junctions based on guanine quadruplexes
R Sha, L Xiang, C Liu, A Balaeff, Y Zhang, P Zhang, Y Li, DN Beratan, ...
Nature nanotechnology 13 (4), 316-321, 2018
452018
B-DNA to zip-DNA: simulating a DNA transition to a novel structure with enhanced charge-transport characteristics
A Balaeff, SL Craig, DN Beratan
The Journal of Physical Chemistry A 115 (34), 9377-9391, 2011
362011
Nonequilibrium hybridization enables discrimination of a point mutation within 5–40 C
M Stancescu, TA Fedotova, J Hooyberghs, A Balaeff, DM Kolpashchikov
Journal of the American Chemical Society 138 (41), 13465-13468, 2016
352016
Cations modulate actin bundle mechanics, assembly dynamics, and structure
N Castaneda, T Zheng, HJ Rivera-Jacquez, HJ Lee, J Hyun, A Balaeff, ...
The Journal of Physical Chemistry B 122 (14), 3826-3835, 2018
312018
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