| CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification T Hashimshony, F Wagner, N Sher, I Yanai Cell reports 2 (3), 666-673, 2012 | 1446 | 2012 |
| A single-cell transcriptomic map of the human and mouse pancreas reveals inter-and intra-cell population structure M Baron, A Veres, SL Wolock, AL Faust, R Gaujoux, A Vetere, JH Ryu, ... Cell systems 3 (4), 346-360. e4, 2016 | 1349 | 2016 |
| CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq T Hashimshony, N Senderovich, G Avital, A Klochendler, Y De Leeuw, ... Genome biology 17, 1-7, 2016 | 1188 | 2016 |
| Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification I Yanai, H Benjamin, M Shmoish, V Chalifa-Caspi, M Shklar, R Ophir, ... Bioinformatics 21 (5), 650-659, 2005 | 1140 | 2005 |
| Exploring tissue architecture using spatial transcriptomics A Rao, D Barkley, GS França, I Yanai Nature 596 (7871), 211-220, 2021 | 945 | 2021 |
| The complete human olfactory subgenome G Glusman, I Yanai, I Rubin, D Lancet Genome research 11 (5), 685-702, 2001 | 889 | 2001 |
| Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas R Moncada, D Barkley, F Wagner, M Chiodin, JC Devlin, M Baron, ... Nature biotechnology 38 (3), 333-342, 2020 | 745 | 2020 |
| A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells M Singer, C Wang, L Cong, ND Marjanovic, MS Kowalczyk, H Zhang, ... Cell 166 (6), 1500-1511. e9, 2016 | 433 | 2016 |
| Rewiring of the yeast transcriptional network through the evolution of motif usage J Ihmels, S Bergmann, M Gerami-Nejad, I Yanai, M McClellan, J Berman, ... Science 309 (5736), 938-940, 2005 | 341 | 2005 |
| Widespread ectopic expression of olfactory receptor genes E Feldmesser, T Olender, M Khen, I Yanai, R Ophir, D Lancet BMC genomics 7, 1-18, 2006 | 289 | 2006 |
| The mid-developmental transition and the evolution of animal body plans M Levin, L Anavy, AG Cole, E Winter, N Mostov, S Khair, N Senderovich, ... Nature 531 (7596), 637-641, 2016 | 275 | 2016 |
| Developmental milestones punctuate gene expression in the Caenorhabditis embryo M Levin, T Hashimshony, F Wagner, I Yanai Developmental cell 22 (5), 1101-1108, 2012 | 249 | 2012 |
| Genes linked by fusion events are generally of the same functional category: a systematic analysis of 30 microbial genomes I Yanai, A Derti, C DeLisi Proceedings of the National Academy of Sciences 98 (14), 7940-7945, 2001 | 232 | 2001 |
| Lymphatic vessels arise from specialized angioblasts within a venous niche J Nicenboim, G Malkinson, T Lupo, L Asaf, Y Sela, O Mayseless, ... Nature 522 (7554), 56-61, 2015 | 231 | 2015 |
| Getting started in gene expression microarray analysis DK Slonim, I Yanai PLoS computational biology 5 (10), e1000543, 2009 | 228 | 2009 |
| Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment D Barkley, R Moncada, M Pour, DA Liberman, I Dryg, G Werba, W Wang, ... Nature genetics 54 (8), 1192-1201, 2022 | 218 | 2022 |
| Mapping gene expression in two Xenopus species: evolutionary constraints and developmental flexibility I Yanai, L Peshkin, P Jorgensen, MW Kirschner Developmental cell 20 (4), 483-496, 2011 | 217 | 2011 |
| Predictome: a database of putative functional links between proteins JC Mellor, I Yanai, KH Clodfelter, J Mintseris, C DeLisi Nucleic acids research 30 (1), 306-309, 2002 | 205 | 2002 |
| Spatiotemporal transcriptomics reveals the evolutionary history of the endoderm germ layer T Hashimshony, M Feder, M Levin, BK Hall, I Yanai Nature 519 (7542), 219-222, 2015 | 201 | 2015 |
| Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms NM Kopelman, D Lancet, I Yanai Nature Genetics 37 (6), 588-589, 2005 | 194 | 2005 |
