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Joshua Goldford
Joshua Goldford
Dayhoff Labs
Verified email at dayhofflabs.com
Title
Cited by
Cited by
Year
Emergent simplicity in microbial community assembly
JE Goldford, N Lu, D Bajić, S Estrela, M Tikhonov, A Sanchez-Gorostiaga, ...
Science 361 (6401), 469-474, 2018
7862018
Functional genomic landscape of cancer-intrinsic evasion of killing by T cells
KA Lawson, CM Sousa, X Zhang, E Kim, R Akthar, JJ Caumanns, Y Yao, ...
Nature 586 (7827), 120-126, 2020
2832020
Remnants of an Ancient Metabolism without Phosphate
JE Goldford, H Hartman, TF Smith, D Segrè
Cell 168 (6), 1126-1134, 2017
2122017
MAT2A inhibition blocks the growth of MTAP-deleted cancer cells by reducing PRMT5-dependent mRNA splicing and inducing DNA damage
P Kalev, ML Hyer, S Gross, Z Konteatis, CC Chen, M Fletcher, M Lein, ...
Cancer Cell 39 (2), 209-224. e11, 2021
1272021
Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities
R Marsland III, W Cui, J Goldford, A Sanchez, K Korolev, P Mehta
PLoS computational biology 15 (2), e1006793, 2019
1162019
Functional attractors in microbial community assembly
S Estrela, JCC Vila, N Lu, D Bajić, M Rebolleda-Gómez, CY Chang, ...
Cell Systems 13 (1), 29-42. e7, 2022
97*2022
Genome-scale architecture of small molecule regulatory networks and the fundamental trade-off between regulation and enzymatic activity
E Reznik, D Christodoulou, JE Goldford, E Briars, U Sauer, D Segrè, ...
Cell reports 20 (11), 2666-2677, 2017
862017
Modern views of ancient metabolic networks
JE Goldford, D Segrè
Current Opinion in Systems Biology 8, 117-124, 2018
702018
Glutaminase inhibition impairs CD8 T cell activation in STK11-/Lkb1-deficient lung cancer
SA Best, PM Gubser, S Sethumadhavan, A Kersbergen, YLN Abril, ...
Cell Metabolism 34 (6), 874-887. e6, 2022
662022
Top-down and bottom-up cohesiveness in microbial community coalescence
J Diaz-Colunga, N Lu, A Sanchez-Gorostiaga, CY Chang, HS Cai, ...
Proceedings of the National Academy of Sciences 119 (6), e2111261119, 2022
60*2022
Environmental boundary conditions for the origin of life converge to an organo-sulfur metabolism
JE Goldford, H Hartman, R Marsland III, D Segrè
Nature ecology & evolution 3 (12), 1715-1724, 2019
542019
Particle‐associated and free‐living bacterial communities in an oligotrophic sea are affected by different environmental factors
D Roth Rosenberg, M Haber, J Goldford, M Lalzar, D Aharonovich, ...
Environmental Microbiology 23 (8), 4295-4308, 2021
422021
The Community Simulator: A Python package for microbial ecology
R Marsland, W Cui, J Goldford, P Mehta
Plos one 15 (3), e0230430, 2020
412020
Metabolic flux analysis using 13C peptide label measurements
DE Mandy, JE Goldford, H Yang, DK Allen, IGL Libourel
The Plant Journal 77 (3), 476-486, 2014
392014
Quantification of Peptide m/z Distributions from 13C-Labeled Cultures with High-Resolution Mass Spectrometry
DK Allen, J Goldford, JK Gierse, D Mandy, C Diepenbrock, IGL Libourel
Analytical chemistry 86 (3), 1894-1901, 2014
232014
A roadmap for the functional annotation of protein families: a community perspective
V de Crécy-Lagard, R Amorin de Hegedus, C Arighi, J Babor, A Bateman, ...
Database 2022, 2022
212022
A thermodynamic atlas of carbon redox chemical space
A Jinich, B Sanchez-Lengeling, H Ren, JE Goldford, E Noor, JN Sanders, ...
Proceedings of the National Academy of Sciences 117 (52), 32910-32918, 2020
182020
Protein cost minimization promotes the emergence of coenzyme redundancy
JE Goldford, AB George, AI Flamholz, D Segrè
Proceedings of the National Academy of Sciences 119 (14), e2110787119, 2022
9*2022
Primitive purine biosynthesis connects ancient geochemistry to modern metabolism
JE Goldford, HB Smith, LM Longo, BA Wing, SE McGlynn
Nature Ecology & Evolution, 1-11, 2024
5*2024
Unsupervised Identification of Isotope-Labeled Peptides
JE Goldford, IGL Libourel
Analytical chemistry 88 (11), 6092-6099, 2016
22016
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Articles 1–20