| RNA structural dynamics as captured by molecular simulations: a comprehensive overview J Sponer, G Bussi, M Krepl, P Banáš, S Bottaro, RA Cunha, A Gil-Ley, ... Chemical reviews 118 (8), 4177-4338, 2018 | 339 | 2018 |
| Adaptive resolution molecular dynamics simulation through coupling to an internal particle reservoir S Fritsch, S Poblete, C Junghans, G Ciccotti, L Delle Site, K Kremer Physical review letters 108 (17), 170602, 2012 | 174 | 2012 |
| Coupling different levels of resolution in molecular simulations S Poblete, M Praprotnik, K Kremer, L Delle Site The Journal of chemical physics 132 (11), 114101, 2010 | 136 | 2010 |
| Hydrodynamics of discrete-particle models of spherical colloids: A multiparticle collision dynamics simulation study S Poblete, A Wysocki, G Gompper, RG Winkler Physical Review E 90 (3), 033314, 2014 | 53 | 2014 |
| Statistical physics problems in adaptive resolution computer simulations of complex fluids M Praprotnik, S Poblete, K Kremer Journal of Statistical Physics 145, 946-966, 2011 | 42 | 2011 |
| Comment on “Adaptive multiscale molecular dynamics of macromolecular fluids” M Praprotnik, S Poblete, L Delle Site, K Kremer Physical review letters 107 (9), 099801, 2011 | 38 | 2011 |
| Inter-dye distance distributions studied by a combination of single-molecule FRET-filtered lifetime measurements and a weighted accessible volume (wAV) algorithm H Höfig, M Gabba, S Poblete, D Kempe, J Fitter Molecules 19 (12), 19269-19291, 2014 | 34 | 2014 |
| A nucleobase-centered coarse-grained representation for structure prediction of RNA motifs S Poblete, S Bottaro, G Bussi Nucleic acids research 46 (4), 1674-1683, 2018 | 31 | 2018 |
| Conformational state distributions and catalytically relevant dynamics of a hinge-bending enzyme studied by single-molecule FRET and a coarse-grained simulation M Gabba, S Poblete, T Rosenkranz, A Katranidis, D Kempe, T Züchner, ... Biophysical journal 107 (8), 1913-1923, 2014 | 30 | 2014 |
| A reference implementation of the adaptive resolution scheme in ESPResSo C Junghans, S Poblete Computer Physics Communications 181 (8), 1449-1454, 2010 | 29 | 2010 |
| Structure and dynamics of a compact state of a multidomain protein, the mercuric ion reductase L Hong, MA Sharp, S Poblete, R Biehl, M Zamponi, N Szekely, ... Biophysical journal 107 (2), 393-400, 2014 | 26 | 2014 |
| Static and dynamic light scattering by red blood cells: A numerical study J Mauer, M Peltomäki, S Poblete, G Gompper, DA Fedosov PLoS One 12 (5), e0176799, 2017 | 14 | 2017 |
| Single-molecule FRET measurements in additive-enriched aqueous solutions D Kempe, M Cerminara, S Poblete, A Schöne, M Gabba, J Fitter Analytical chemistry 89 (1), 694-702, 2017 | 13 | 2017 |
| Structural 3d domain reconstruction of the rna genome from viruses with secondary structure models S Poblete, HV Guzman Viruses 13 (8), 1555, 2021 | 7 | 2021 |
| Effects and limitations of a nucleobase-driven backmapping procedure for nucleic acids using steered molecular dynamics S Poblete, S Bottaro, G Bussi Biochemical and biophysical research communications 498 (2), 352-358, 2018 | 7 | 2018 |
| Characterization of the melting transition in two dimensions at vanishing external pressure using molecular dynamics simulations D Asenjo, F Lund, S Poblete, R Soto, M Sotomayor Physical Review B 83 (17), 174110, 2011 | 2 | 2011 |
| RNA Secondary Structures Regulate Adsorption of Fragments onto Flat Substrates S Poblete, A Bozic, M Kanduc, R Podgornik, HV Guzman ACS omega 6 (48), 32823-32831, 2021 | 1 | 2021 |
| Brief Comparison between Experimental and Computationally Generated Ensembles of RNA Dinucleotides S Poblete, T Pérez-Acle Journal of Chemical Information and Modeling 60 (2), 989-994, 2019 | 1 | 2019 |
| A nucleobase-centric coarse-grained model for structure prediction of RNA fragments S Poblete, S Bottaro, G Bussi Biophysical Journal 108 (2), 235a, 2015 | 1 | 2015 |
| Thermodynamic concepts in adaptive resolution simulations S Poblete Johannes Gutenberg-Universität Mainz, 2010 | 1 | 2010 |
Giovanni BussiScuola Internazionale Superiore di Studi Avanzati, Trieste, ItalyVerified email at sissa.it
