Jie Shen
Cited by
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admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties
F Cheng, W Li, Y Zhou, J Shen, Z Wu, G Liu, PW Lee, Y Tang
Journal of Chemical Information and Modeling, 2012
An in silico skin absorption model for fragrance materials
J Shen, L Kromidas, T Schultz, S Bhatia
Food and chemical toxicology 74, 164-176, 2014
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology 32 (9), 903-914, 2014
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ...
Nature biotechnology 32 (9), 926-932, 2014
Comparison of cramer classification between toxtree, the OECD QSAR Toolbox and expert judgment
S Bhatia, T Schultz, D Roberts, J Shen, L Kromidas, AM Api
Regulatory Toxicology and Pharmacology 71 (1), 52-62, 2015
Comparison of RNA-seq and microarray-based models for clinical endpoint prediction
W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang, D Thierry-Mieg, ...
Genome biology 16 (1), 1-12, 2015
Estimation of ADME properties with substructure pattern recognition
J Shen, F Cheng, Y Xu, W Li, Y Tang
Journal of chemical information and modeling 50 (6), 1034-1041, 2010
CERAPP: collaborative estrogen receptor activity prediction project
K Mansouri, A Abdelaziz, A Rybacka, A Roncaglioni, A Tropsha, A Varnek, ...
Environmental health perspectives 124 (7), 1023-1033, 2016
Role of acetylation and extracellular location of heat shock protein 90α in tumor cell invasion
Y Yang, R Rao, J Shen, Y Tang, W Fiskus, J Nechtman, P Atadja, K Bhalla
Cancer research 68 (12), 4833-4842, 2008
Classification of cytochrome P450 inhibitors and noninhibitors using combined classifiers
F Cheng, Y Yu, J Shen, L Yang, W Li, G Liu, PW Lee, Y Tang
Journal of chemical information and modeling 51 (5), 996-1011, 2011
T4 report: Toward good read-across practice (GRAP) guidance
N Ball, MTD Cronin, J Shen, K Blackburn, ED Booth, M Bouhifd, E Donley, ...
Altex 33 (2), 149, 2016
Adverse drug events: database construction and in silico prediction
F Cheng, W Li, X Wang, Y Zhou, Z Wu, J Shen, Y Tang
Journal of chemical information and modeling 53 (4), 744-752, 2013
In Silico Assessment of Chemical Biodegradability
F Cheng, Y Ikenaga, Y Zhou, Y Yu, W Li, J Shen, Z Du, L Chen, C Xu, ...
Journal of Chemical Information and Modeling, 2012
t4 report: Supporting read-across using biological data
H Zhu, M Bouhifd, N Kleinstreuer, ED Kroese, Z Liu, T Luechtefeld, ...
Altex 33 (2), 167, 2016
Exploring coumarin egress channels in human cytochrome P450 2A6 by random acceleration and steered molecular dynamics simulations
W Li, J Shen, G Liu, Y Tang, T Hoshino
Proteins: Structure, Function, and Bioinformatics 79 (1), 271-281, 2011
Developing measures of cognitive impairment in the real world from consumer-grade multimodal sensor streams
R Chen, F Jankovic, N Marinsek, L Foschini, L Kourtis, A Signorini, ...
Proceedings of the 25th ACM SIGKDD international conference on knowledge …, 2019
In silico prediction of Tetrahymena pyriformis toxicity for diverse industrial chemicals with substructure pattern recognition and machine learning methods
F Cheng, J Shen, Y Yu, W Li, G Liu, PW Lee, Y Tang
Chemosphere 82 (11), 1636-1643, 2011
Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes
J Shen, W Zhang, H Fang, R Perkins, W Tong, H Hong
BMC bioinformatics 14, 1-11, 2013
EADB: an estrogenic activity database for assessing potential endocrine activity
J Shen, L Xu, H Fang, AM Richard, JD Bray, RS Judson, G Zhou, ...
toxicological sciences 135 (2), 277-291, 2013
Central reading of ulcerative colitis clinical trial videos using neural networks
K Gottlieb, J Requa, W Karnes, RC Gudivada, J Shen, E Rael, V Arora, ...
Gastroenterology 160 (3), 710-719. e2, 2021
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Articles 1–20