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Babak Alipanahi
Babak Alipanahi
Exai Bio
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Title
Cited by
Cited by
Year
Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning
B Alipanahi, A Delong, MT Weirauch, BJ Frey
Nature biotechnology 33 (8), 831-838, 2015
29102015
Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies
MA Nalls, C Blauwendraat, CL Vallerga, K Heilbron, S Bandres-Ciga, ...
The Lancet Neurology 18 (12), 1091-1102, 2019
15292019
Association studies of up to 1.2 million individuals yield new insights into the genetic etiology of tobacco and alcohol use
M Liu, Y Jiang, R Wedow, Y Li, DM Brazel, F Chen, G Datta, ...
Nature genetics 51 (2), 237-244, 2019
14532019
The human splicing code reveals new insights into the genetic determinants of disease
HY Xiong, B Alipanahi, LJ Lee, H Bretschneider, D Merico, RKC Yuen, ...
Science 347 (6218), 1254806, 2015
13902015
Underspecification presents challenges for credibility in modern machine learning
A D'Amour, K Heller, D Moldovan, B Adlam, B Alipanahi, A Beutel, ...
Journal of Machine Learning Research 23 (226), 1-61, 2022
6602022
Widespread intron retention in mammals functionally tunes transcriptomes
U Braunschweig, NL Barbosa-Morais, Q Pan, EN Nachman, B Alipanahi, ...
Genome research 24 (11), 1774-1786, 2014
6592014
An atlas of genetic influences on osteoporosis in humans and mice
JA Morris, JP Kemp, SE Youlten, L Laurent, JG Logan, RC Chai, ...
Nature genetics 51 (2), 258-266, 2019
6092019
Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences
R Karlsson Linnér, P Biroli, E Kong, SFW Meddens, R Wedow, ...
Nature genetics 51 (2), 245-257, 2019
5762019
Whole-genome sequencing expands diagnostic utility and improves clinical management in paediatric medicine
DJ Stavropoulos, D Merico, R Jobling, S Bowdin, N Monfared, ...
NPJ genomic medicine 1 (1), 1-9, 2016
3682016
MBNL proteins repress ES-cell-specific alternative splicing and reprogramming
H Han, M Irimia, PJ Ross, HK Sung, B Alipanahi, L David, A Golipour, ...
Nature 498 (7453), 241-245, 2013
3432013
Machine learning in genomic medicine: a review of computational problems and data sets
MKK Leung, A Delong, B Alipanahi, BJ Frey
Proceedings of the IEEE 104 (1), 176-197, 2015
3132015
Genome-wide characteristics of de novo mutations in autism
RKC Yuen, D Merico, H Cao, G Pellecchia, B Alipanahi, ...
NPJ genomic medicine 1 (1), 1-10, 2016
2322016
Identification of novel risk loci for restless legs syndrome in genome-wide association studies in individuals of European ancestry: a meta-analysis
B Schormair, C Zhao, S Bell, E Tilch, AV Salminen, B Pütz, Y Dauvilliers, ...
The Lancet Neurology 16 (11), 898-907, 2017
2162017
Are random forests truly the best classifiers?
M Wainberg, B Alipanahi, BJ Frey
Journal of Machine Learning Research 17 (110), 1-5, 2016
1882016
A genetic investigation of sex bias in the prevalence of attention-deficit/hyperactivity disorder
J Martin, RK Walters, D Demontis, M Mattheisen, SH Lee, E Robinson, ...
Biological psychiatry 83 (12), 1044-1053, 2018
1772018
Brain-expressed exons under purifying selection are enriched for de novo mutations in autism spectrum disorder
M Uddin, K Tammimies, G Pellecchia, B Alipanahi, P Hu, Z Wang, D Pinto, ...
Nature genetics 46 (7), 742-747, 2014
1702014
Inherited myeloproliferative neoplasm risk affects haematopoietic stem cells
EL Bao, SK Nandakumar, X Liao, AG Bick, J Karjalainen, M Tabaka, ...
Nature 586 (7831), 769-775, 2020
1042020
Common variant burden contributes to the familial aggregation of migraine in 1,589 families
P Gormley, MI Kurki, ME Hiekkala, K Veerapen, P Häppölä, AA Mitchell, ...
Neuron 98 (4), 743-753. e4, 2018
972018
Systems and methods for classifying, prioritizing and interpreting genetic variants and therapies using a deep neural network
B Frey, MKK Leung, AT Delong, HY Xiong, B Alipanahi, LJ Lee, ...
US Patent 10,185,803, 2019
952019
The effect of LRRK2 loss-of-function variants in humans
N Whiffin, IM Armean, A Kleinman, JL Marshall, EV Minikel, JK Goodrich, ...
Nature Medicine 26 (6), 869-877, 2020
932020
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