Prof. Dr. Dimitrios P. Vlachakis

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George P. ChrousosProfessor, School of Medicine, National and Kapodistrian University of AthensVerified email at med.uoa.gr
S KossidaProfessor of BioinformaticsVerified email at igh.cnrs.fr
FLORA BACOPOULOUAssociate Professor, UNESCO Chair Adolescent Health Care, School of Medicine, National and Kapodistrian University of Athens, GreeceVerified email at med.uoa.gr
Dr. Louis Papageorgiou, BSc, MSc, PhDDepartment of Biomedical Sciences | University of West AtticaVerified email at uniwa.gr
E PapakonstantinouAgricultural University of AthensVerified email at aua.gr
Vasileios MegalooikonomouProfessor of Computer Engineering and Informatics, University of PatrasVerified email at ceid.upatras.gr
Efthimiadou, AHellenic Agricultural Organization DEMETER, Soil and Water Research InstituteVerified email at swri.gr
Evangelia CharmandariProfessor of Pediatric and Adolescent Endocrinology, National and Kapodistrian University of AthensVerified email at med.uoa.gr
Spyridon Champeris TsanirasPostdoctoral Fellow at Cold Spring Harbor Laboratory; Editor of Journal of Molecular BiochemistryVerified email at cshl.edu
George N. GoulielmosProfessor of Human Molecular Genetics, Medical School of CreteVerified email at uoc.gr
Demetrios SpandidosProfessor Emeritus, Medical School, University of Crete, Heraklion, GreeceVerified email at spandidos-publications.com
AMALIA SERTEDAKINATIONAL AND KAPODISTRIAN UNIVERSITY, MEDICAL SCHOOLVerified email at med.uoa.gr
Nikolaos LabrouProfessor Agricultural University of athensVerified email at aua.gr
Ioulia KokkaNational and Kapodistrian University of Athens · Division of PsychiatryVerified email at med.uoa.gr
Christina Kanaka GantenbeinProfessor of Pediatric and Pediatric Endocrinology, National and Kapodistrian University AthensVerified email at med.uoa.gr
Andrea BrancaleUnversity of Chemistry and Technology, PragueVerified email at vscht.cz
Elena BencurovaUniversity of WürzburgVerified email at uni-wuerzburg.de
Erik Bongcam-RudloffProfessor in Bioinformatics,Swedish University of Agricultural Sciences, SwedenVerified email at slu.se
Panagiotis VlamosProfessor of Computer Science, Ionian UniversityVerified email at ionio.gr
MARIA I. ZERVOU M.Sc., PhDUniversity of Crete, School of MedicineVerified email at med.uoc.gr

Prof. Dr. Dimitrios P. Vlachakis

Professor-Reader in Genetics, Agr University Athens, URI Medical School Athens, Kings College London

Verified email at aua.gr - Homepage

Genetics Epigenetics Bioinformatics Drug Design Precision Medicine


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Transcription factors and evolution: an integral part of gene expression T Mitsis, A Efthimiadou, F Bacopoulou, D Vlachakis, GP Chrousos, ... World Academy of Sciences Journal 2 (1), 3-8, 2020	154	2020
Current state-of-the-art molecular dynamics methods and applications D Vlachakis, E Bencurova, N Papangelopoulos, S Kossida Advances in protein chemistry and structural biology 94, 269-313, 2014	109	2014
EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation A Amidi, S Amidi, D Vlachakis, V Megalooikonomou, N Paragios, ... PeerJ 6, e4750, 2018	108	2018
STING orchestrates the crosstalk between polyunsaturated fatty acid metabolism and inflammatory responses IK Vila, H Chamma, A Steer, M Saccas, C Taffoni, E Turtoi, LS Reinert, ... Cell metabolism 34 (1), 125-139. e8, 2022	83	2022
Genomic big data hitting the storage bottleneck L Papageorgiou, P Eleni, S Raftopoulou, M Mantaiou, ... EMBnet. journal 24, 2018	72	2018
Statistical and machine learning techniques in human microbiome studies: contemporary challenges and solutions I Moreno-Indias, L Lahti, M Nedyalkova, I Elbere, G Roshchupkin, ... Frontiers in microbiology 12, 635781, 2021	64	2021
A novel point mutation of the human glucocorticoid receptor gene causes primary generalized glucocorticoid resistance through impaired interaction with the LXXLL motif of the … NC Nicolaides, ML Roberts, T Kino, G Braatvedt, DE Hurt, E Katsantoni, ... The Journal of Clinical Endocrinology & Metabolism 99 (5), E902-E907, 2014	62	2014
Discovery of a novel HCV helicase inhibitor by a de novo drug design approach S Kandil, S Biondaro, D Vlachakis, AC Cummins, A Coluccia, C Berry, ... Bioorganic & medicinal chemistry letters 19 (11), 2935-2937, 2009	62	2009
Competitive inhibition of human poly (A)-specific ribonuclease (PARN) by synthetic fluoro-pyranosyl nucleosides NAA Balatsos, D Vlachakis, P Maragozidis, S Manta, D Anastasakis, ... Biochemistry 48 (26), 6044-6051, 2009	60	2009
Evaluation of plant growth promoting bacteria strains on growth, yield and quality of industrial tomato N Katsenios, V Andreou, P Sparangis, N Djordjevic, M Giannoglou, ... Microorganisms 9 (10), 2099, 2021	56	2021
Gromita: a fully integrated graphical user interface to gromacs 4 D Sellis, D Vlachakis, M Vlassi Bioinformatics and biology insights 3, BBI. S3207, 2009	50	2009
State-of-the-art technology in modern computer-aided drug design GA Dalkas, D Vlachakis, D Tsagkrasoulis, A Kastania, S Kossida Briefings in bioinformatics 14 (6), 745-752, 2013	48	2013
An updated evolutionary study of Flaviviridae NS3 helicase and NS5 RNA-dependent RNA polymerase reveals novel invariable motifs as potential pharmacological targets L Papageorgiou, S Loukatou, K Sofia, D Maroulis, D Vlachakis Molecular BioSystems 12 (7), 2080-2093, 2016	47	2016
A holistic evolutionary and structural study of flaviviridae provides insights into the function and inhibition of HCV helicase D Vlachakis, VL Koumandou, S Kossida PeerJ 1, e74, 2013	42	2013
Phosphorylation of the arginine/serine repeats of lamin B receptor by SRPK1—Insights from molecular dynamics simulations D Sellis, V Drosou, D Vlachakis, N Voukkalis, T Giannakouros, M Vlassi Biochimica et Biophysica Acta (BBA)-General Subjects 1820 (1), 44-55, 2012	40	2012
Functional toll-like receptor 9 expression and CXCR3 ligand release in pulmonary sarcoidosis J Schnerch, A Prasse, D Vlachakis, KL Schuchardt, DV Pechkovsky, ... American journal of respiratory cell and molecular biology 55 (5), 749-757, 2016	37	2016
Introducing Drugster: a comprehensive and fully integrated drug design, lead and structure optimization toolkit D Vlachakis, D Tsagrasoulis, V Megalooikonomou, S Kossida Bioinformatics 29 (1), 126-128, 2013	37	2013
Molecular mechanisms of the novel coronavirus SARS-CoV-2 and potential anti-COVID19 pharmacological targets since the outbreak of the pandemic D Vlachakis, E Papakonstantinou, T Mitsis, K Pierouli, I Diakou, ... Food and Chemical Toxicology 146, 111805, 2020	36	2020
A novel mutation of the hGR gene causing Chrousos syndrome NC Nicolaides, EB Geer, D Vlachakis, ML Roberts, AMG Psarra, ... European Journal of Clinical Investigation 45 (8), 782-791, 2015	36	2015
Molecular dynamics simulations through GPU video games technologies S Loukatou, L Papageorgiou, P Fakourelis, A Filntisi, E Polychronidou, ... Journal of molecular biochemistry 3 (2), 64, 2014	36	2014

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