| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019 | 842 | 2019 |
| Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019 | 661 | 2019 |
| Extensive transmission of microbes along the gastrointestinal tract TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ... eLife 8, e42693, 2019 | 372 | 2019 |
| Unravelling the collateral damage of antibiotics on gut bacteria L Maier, CV Goemans, J Wirbel, M Kuhn, C Eberl, M Pruteanu, P Müller, ... Nature 599 (7883), 120-124, 2021 | 192 | 2021 |
| Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox J Wirbel, K Zych, M Essex, N Karcher, E Kartal, G Salazar, P Bork, ... Genome Biology 22 (1), 1-27, 2021 | 141 | 2021 |
| A faecal microbiota signature with high specificity for pancreatic cancer E Kartal, TSB Schmidt, E Molina-Montes, S Rodríguez-Perales, J Wirbel, ... Gut 71 (7), 1359-1372, 2022 | 125 | 2022 |
| Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO B Velten, JM Braunger, R Argelaguet, D Arnol, J Wirbel, D Bredikhin, ... Nature methods 19 (2), 179-186, 2022 | 87 | 2022 |
| Commensal Clostridiales strains mediate effective anti-cancer immune response against solid tumors A Montalban-Arques, E Katkeviciute, P Busenhart, A Bircher, J Wirbel, ... Cell Host & Microbe 29 (10), 1573-1588. e7, 2021 | 85 | 2021 |
| Metabolic models predict bacterial passengers in colorectal cancer DR Garza, R Taddese, J Wirbel, G Zeller, A Boleij, MA Huynen, BE Dutilh Cancer & metabolism 8, 1-13, 2020 | 38 | 2020 |
| Phosphoproteomics-based profiling of kinase activities in cancer cells J Wirbel, P Cutillas, J Saez-Rodriguez Cancer Systems Biology: Methods and Protocols, 103-132, 2018 | 36 | 2018 |
| Calorie restriction improves metabolic state independently of gut microbiome composition: a randomized dietary intervention trial SA Sowah, A Milanese, R Schübel, J Wirbel, E Kartal, TS Johnson, ... Genome Medicine 14 (1), 1-21, 2022 | 26 | 2022 |
| Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments HJ Ruscheweyh, A Milanese, L Paoli, N Karcher, Q Clayssen, MI Keller, ... Microbiome 10 (1), 1-12, 2022 | 25 | 2022 |
| Depression and fatigue in active IBD from a microbiome perspective—a Bayesian approach to faecal metagenomics AK Thomann, T Wüstenberg, J Wirbel, LL Knoedler, PA Thomann, ... BMC medicine 20 (1), 1-17, 2022 | 18 | 2022 |
| Microbiota-dependent activation of the myeloid calcineurin-NFAT pathway inhibits B7H3-and B7H4-dependent anti-tumor immunity in colorectal cancer K Peuker, A Strigli, DVF Tauriello, A Hendricks, W von Schönfels, ... Immunity 55 (4), 701-717. e7, 2022 | 18 | 2022 |
| Dissecting the collateral damage of antibiotics on gut microbes L Maier, CV Goemans, M Pruteanu, J Wirbel, M Kuhn, E Cacace, ... BioRxiv, 2020.01. 09.893560, 2020 | 13 | 2020 |
| SIAMCAT: user-friendly and versatile machine learning workflows for statistically rigorous microbiome analyses J Wirbel, K Zych, M Essex, N Karcher, E Kartal, G Salazar, P Bork, ... bioRxiv, 931808, 2020 | 12 | 2020 |
| Prediction of combination therapies based on topological modeling of the immune signaling network in Multiple Sclerosis M Bernardo-Faura, M Rinas, J Wirbel, I Pertsovskaya, V Pliaka, ... Genome Medicine 13 (1), 1-16, 2021 | 11 | 2021 |
| C. difficile may be overdiagnosed in adults and is a prevalent commensal in infants P Ferretti, J Wirbel, OM Maistrenko, T Van Rossum, R Alves, A Fullam, ... eLife 12, 2023 | 3 | 2023 |
| Intragenic DNA inversions expand bacterial coding capacity RB Chanin, PT West, RM Park, J Wirbel, GZM Green, AM Miklos, MO Gill, ... bioRxiv, 2023.03. 11.532203, 2023 | 3 | 2023 |
| Reference genome-independent taxonomic profiling of microbiomes with mOTUs3 HJ Ruscheweyh, A Milanese, L Paoli, N Karcher, Q Clayssen, MI Metzger, ... bioRxiv, 2021.04. 20.440600, 2021 | 3 | 2021 |
Georg ZellerEMBL, HeidelbergVerified email at embl.de
