| Singular value decomposition and principal component analysis M Wall, A Rechtsteiner, L Rocha A practical approach to microarray data analysis, 91-109, 2003 | 1889 | 2003 |
| Design of gene circuits: lessons from bacteria ME Wall, WS Hlavacek, MA Savageau Nature Reviews Genetics 5 (1), 34-42, 2004 | 279 | 2004 |
| Allostery in a coarse-grained model of protein dynamics D Ming, ME Wall Physical review letters 95 (19), 198103, 2005 | 173 | 2005 |
| A large-format high-resolution area X-ray detector based on a fiber-optically bonded charge-coupled device (CCD) MW Tate, EF Eikenberry, SL Barna, ME Wall, JL Lowrance, SM Gruner Journal of applied crystallography 28 (2), 196-205, 1995 | 155 | 1995 |
| SVDMAN—singular value decomposition analysis of microarray data ME Wall, PA Dyck, TS Brettin Bioinformatics 17 (6), 566-568, 2001 | 148 | 2001 |
| Scaling molecular dynamics beyond 100,000 processor cores for large‐scale biophysical simulations J Jung, W Nishima, M Daniels, G Bascom, C Kobayashi, A Adedoyin, ... Journal of computational chemistry 40 (21), 1919-1930, 2019 | 136 | 2019 |
| Motions of calmodulin characterized using both Bragg and diffuse X-ray scattering ME Wall, JB Clarage, GN Phillips Structure 5 (12), 1599-1612, 1997 | 118 | 1997 |
| Quantifying allosteric effects in proteins D Ming, ME Wall Proteins: Structure, Function, and Bioinformatics 59 (4), 697-707, 2005 | 111 | 2005 |
| Mechanisms associated with cGMP binding and activation of cGMP-dependent protein kinase ME Wall, SH Francis, JD Corbin, K Grimes, R Richie-Jannetta, J Kotera, ... Proceedings of the National Academy of Sciences 100 (5), 2380-2385, 2003 | 106 | 2003 |
| Multiple functions of a feed-forward-loop gene circuit ME Wall, MJ Dunlop, WS Hlavacek Journal of molecular biology 349 (3), 501-514, 2005 | 101 | 2005 |
| Activation of the Escherichia coli marA/soxS/rob Regulon in Response to Transcriptional Activator Concentration RG Martin, ES Bartlett, JL Rosner, ME Wall Journal of molecular biology 380 (2), 278-284, 2008 | 86 | 2008 |
| Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis M Dasgupta, D Budday, SHP De Oliveira, P Madzelan, ... Proceedings of the National Academy of Sciences 116 (51), 25634-25640, 2019 | 78 | 2019 |
| Design principles for regulator gene expression in a repressible gene circuit ME Wall, WS Hlavacek, MA Savageau Journal of Molecular Biology 332 (4), 861-876, 2003 | 70 | 2003 |
| Three-dimensional diffuse x-ray scattering from crystals of Staphylococcal nuclease ME Wall, SE Ealick, SM Gruner Proceedings of the National Academy of Sciences 94 (12), 6180-6184, 1997 | 69 | 1997 |
| Interactions in native binding sites cause a large change in protein dynamics D Ming, ME Wall Journal of molecular biology 358 (1), 213-223, 2006 | 66 | 2006 |
| Large-scale shape changes in proteins and macromolecular complexes ME Wall, SC Gallagher, J Trewhella Annual review of physical chemistry 51 (1), 355-380, 2000 | 66 | 2000 |
| Conformational dynamics of a crystalline protein from microsecond-scale molecular dynamics simulations and diffuse X-ray scattering ME Wall, AH Van Benschoten, NK Sauter, PD Adams, JS Fraser, ... Proceedings of the National Academy of Sciences 111 (50), 17887-17892, 2014 | 63 | 2014 |
| A model of troponin-I in complex with troponin-C using hybrid experimental data: The inhibitory region is a β-hairpin CS Tung, ME Wall, SC Gallagher, J Trewhella Protein Science 9 (7), 1312-1326, 2000 | 60 | 2000 |
| Literature mining of protein-residue associations with graph rules learned through distant supervision KE Ravikumar, H Liu, JD Cohn, ME Wall, K Verspoor Journal of biomedical semantics 3, 1-23, 2012 | 49 | 2012 |
| High-resolution macromolecular structure determination using CCD detectors and synchrotron radiation RL Walter, DJ Thiel, SL Barna, MW Tate, ME Wall, EF Eikenberry, ... Structure 3 (8), 835-844, 1995 | 49 | 1995 |
