| Nanopore sequencing and assembly of a human genome with ultra-long reads M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ... Nature biotechnology 36 (4), 338-345, 2018 | 1996 | 2018 |
| Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 1162 | 2018 |
| GOATOOLS: A Python library for Gene Ontology analyses DV Klopfenstein, L Zhang, BS Pedersen, F Ramírez, A Warwick Vesztrocy, ... Scientific reports 8 (1), 1-17, 2018 | 902 | 2018 |
| Genome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis TE Fingerlin, E Murphy, W Zhang, AL Peljto, KK Brown, MP Steele, ... Nature genetics 45 (6), 613-620, 2013 | 841 | 2013 |
| Mosdepth: quick coverage calculation for genomes and exomes BS Pedersen, AR Quinlan Bioinformatics 34 (5), 867-868, 2018 | 801 | 2018 |
| Pybedtools: a flexible Python library for manipulating genomic datasets and annotations RK Dale, BS Pedersen, AR Quinlan Bioinformatics 27 (24), 3423-3424, 2011 | 489 | 2011 |
| Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes BC Thomas, B Pedersen, M Freeling Genome research 16 (7), 934-946, 2006 | 484 | 2006 |
| Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids E Lyons, B Pedersen, J Kane, M Alam, R Ming, H Tang, X Wang, ... Plant physiology 148 (4), 1772-1781, 2008 | 425 | 2008 |
| Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values BS Pedersen, DA Schwartz, IV Yang, KJ Kechris Bioinformatics 28 (22), 2986-2988, 2012 | 406 | 2012 |
| Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs MR Woodhouse, JC Schnable, BS Pedersen, E Lyons, D Lisch, ... PLoS biology 8 (6), e1000409, 2010 | 315 | 2010 |
| DNA methylation and childhood asthma in the inner city IV Yang, BS Pedersen, A Liu, GT O'Connor, SJ Teach, M Kattan, ... Journal of Allergy and Clinical Immunology 136 (1), 69-80, 2015 | 259 | 2015 |
| A map of constrained coding regions in the human genome JM Havrilla, BS Pedersen, RM Layer, AR Quinlan Nature genetics 51 (1), 88-95, 2019 | 258 | 2019 |
| The value of nonmodel genomes and an example using SynMap within CoGe to dissect the hexaploidy that predates the rosids E Lyons, B Pedersen, J Kane, M Freeling Tropical Plant Biology 1, 181-190, 2008 | 241 | 2008 |
| Who’s who? Detecting and resolving sample anomalies in human DNA sequencing studies with peddy BS Pedersen, AR Quinlan The American Journal of Human Genetics 100 (3), 406-413, 2017 | 224 | 2017 |
| Overlooked roles of DNA damage and maternal age in generating human germline mutations Z Gao, P Moorjani, TA Sasani, BS Pedersen, AR Quinlan, LB Jorde, ... Proceedings of the National Academy of Sciences 116 (19), 9491-9500, 2019 | 200 | 2019 |
| Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis IV Yang, BS Pedersen, E Rabinovich, CE Hennessy, EJ Davidson, ... American journal of respiratory and critical care medicine 190 (11), 1263-1272, 2014 | 199 | 2014 |
| Many or most genes in Arabidopsis transposed after the origin of the order Brassicales M Freeling, E Lyons, B Pedersen, M Alam, R Ming, D Lisch Genome research 18 (12), 1924-1937, 2008 | 191 | 2008 |
| Altered Patterns of Fractionation and Exon Deletions in Brassica rapa Support a Two-Step Model of Paleohexaploidy H Tang, MR Woodhouse, F Cheng, JC Schnable, BS Pedersen, G Conant, ... Genetics 190 (4), 1563-1574, 2012 | 188 | 2012 |
| Vcfanno: fast, flexible annotation of genetic variants BS Pedersen, RM Layer, AR Quinlan Genome biology 17, 1-9, 2016 | 178 | 2016 |
| Large, three-generation human families reveal post-zygotic mosaicism and variability in germline mutation accumulation TA Sasani, BS Pedersen, Z Gao, L Baird, M Przeworski, LB Jorde, ... Elife 8, e46922, 2019 | 173 | 2019 |
Aaron QuinlanProfessor of Human Genetics, U. of Utah; https://github.com/arq5x/vitae/raw/master/quinlan.cv.pdfVerified email at genetics.utah.edu
