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Jerry M. Parks
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The genetic basis for bacterial mercury methylation
JM Parks, A Johs, M Podar, R Bridou, RA Hurt Jr, SD Smith, ...
Science 339 (6125), 1332-1335, 2013
8412013
Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum
SD Brown, AM Guss, TV Karpinets, JM Parks, N Smolin, S Yang, ML Land, ...
Proceedings of the National Academy of Sciences 108 (33), 13752-13757, 2011
1922011
Targeted isolation and cultivation of uncultivated bacteria by reverse genomics
KL Cross, JH Campbell, M Balachandran, AG Campbell, CJ Cooper, ...
Nature Biotechnology 37, 1314–1321, 2019
1812019
Quantum mechanics/molecular mechanics minimum free-energy path for accurate reaction energetics in solution and enzymes: Sequential sampling and optimization on the potential …
H Hu, Z Lu, JM Parks, SK Burger, W Yang
Journal of Chemical Physics 128, 034105, 2008
1272008
Supercomputer-based ensemble docking drug discovery pipeline with application to Covid-19
A Acharya, R Agarwal, MB Baker, J Baudry, D Bhowmik, S Boehm, ...
Journal of Chemical Information and Modeling, 2020
1122020
Plant Cell Walls: Basics of Structure, Chemistry, Accessibility and the Influence on Conversion
BH Davison, JM Parks, MF Davis, BS Donohoe
Aqueous Pretreatment of Plant Biomass for Biological and Chemical Conversion …, 2013
972013
Down-regulation of the caffeic acid O-methyltransferase gene in switchgrass reveals a novel monolignol analog
TJ Tschaplinski, RF Standaert, NL Engle, MZ Martin, AK Sangha, ...
Biotechnology for Biofuels 5, 71, 2012
972012
Radical Coupling Reactions in Lignin Synthesis: A Density Functional Theory Study
AK Sangha, JM Parks, RF Standaert, A Ziebell, M Davis, JC Smith
Journal of Physical Chemistry B 116, 4760-4768, 2012
912012
How to discover antiviral drugs quickly
JM Parks, JC Smith
New England Journal of Medicine 382 (23), 2261-2264, 2020
892020
Reviving antibiotics: efflux pump inhibitors that interact with AcrA, a membrane fusion protein of the AcrAB-TolC multidrug efflux pump
N Abdali, JM Parks, KM Haynes, JL Chaney, AT Green, D Wolloscheck, ...
ACS Infectious Diseases 3 (1), 89-98, 2017
812017
Mechanism of Hg−C Protonolysis in the Organomercurial Lyase MerB
JM Parks, H Guo, C Momany, L Liang, SM Miller, AO Summers, JC Smith
Journal of the American Chemical Society 131 (37), 13278-13285, 2009
792009
Site-directed mutagenesis of HgcA and HgcB reveals amino acid residues important for mercury methylation
SD Smith, R Bridou, A Johs, JM Parks, DA Elias, RA Hurt, SD Brown, ...
Applied and Environmental Microbiology 81 (9), 3205-3217, 2015
772015
Molecular simulation as a tool for studying lignin
AK Sangha, L Petridis, JC Smith, A Ziebell, JM Parks
Environmental Progress & Sustainable Energy 31 (1), 47-54, 2012
672012
Distribution of mechanical stress in the Escherichia coli cell envelope
H Hwang, N Paracini, JM Parks, JH Lakey, JC Gumbart
Biochimica et Biophysica Acta (BBA)-Biomembranes 1860 (12), 2566-2575, 2018
642018
Why mercury prefers soft ligands
D Riccardi, HB Guo, JM Parks, B Gu, AO Summers, SM Miller, L Liang, ...
The Journal of Physical Chemistry Letters 4 (14), 2317-2322, 2013
602013
Benchmark Interaction Energies for Biologically Relevant Noncovalent Complexes Containing Divalent Sulfur
BJ Mintz, JM Parks
Journal of Physical Chemistry A 116 (3), 1086-1092, 2012
602012
Chemical Factors that Control Lignin Polymerization
AK Sangha, BH Davison, RF Standaert, MF Davis, JC Smith, JM Parks
The Journal of Physical Chemistry B 118 (1), 164-170, 2014
562014
Experimental validation of the docking orientation of Cdc25 with its Cdk2-CycA protein substrate
J Sohn, JM Parks, G Buhrman, P Brown, K Kristjánsdóttir, A Safi, ...
Biochemistry 44 (50), 16563-16573, 2005
532005
Direct visualization of critical hydrogen atoms in a pyridoxal 5′-phosphate enzyme
S Dajnowicz, RC Johnston, JM Parks, MP Blakeley, DA Keen, KL Weiss, ...
Nature communications 8 (1), 955, 2017
522017
X-ray structure of a Hg2+ complex of mercuric reductase (MerA) and quantum mechanical/molecular mechanical study of Hg2+ transfer between the C-terminal and buried catalytic …
P Lian, HB Guo, D Riccardi, A Dong, JM Parks, Q Xu, EF Pai, SM Miller, ...
Biochemistry 53 (46), 7211-7222, 2014
522014
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